RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 C1orf216Q8TAB5 229 aa16.58■□□□□ 0.24
SGMS1-209ENST00000609445 MRGPRX3Q96LB0 322 aa16.58■□□□□ 0.24
SGMS1-209ENST00000609445 ZDHHC5Q9C0B5 715 aa16.58■□□□□ 0.24
SGMS1-209ENST00000609445 FBRSQ9HAH7 460 aa16.58■□□□□ 0.24
SGMS1-209ENST00000609445 POPDC2Q9HBU9 364 aa16.58■□□□□ 0.24
SGMS1-209ENST00000609445 SUN2Q9UH99 717 aa16.58■□□□□ 0.24
SGMS1-209ENST00000609445 AJAP1Q9UKB5 411 aaPredicted RBP16.58■□□□□ 0.24
SGMS1-209ENST00000609445 ASPMQ8IZT6 3477 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 A0A1B0GVT2 93 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 TYW5A2RUC4 315 aaKnown RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 SIN3BO75182 1162 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 SEMA4FO95754 770 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 TRUB2O95900 331 aaKnown RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 IGLV3-25P01717 112 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 APOEP02649 317 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 C7P10643 843 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 TACR2P21452 398 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 CSNK1EP49674 416 aaKnown RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 NUMBP49757 651 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 SLC14A1Q13336 389 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 PDCLQ13371 301 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 CDH18Q13634 790 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 PITRM1Q5JRX3 1037 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 ZNF776Q68DI1 518 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 GBP6Q6ZN66 633 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 CHSY1Q86X52 802 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 DHX40Q8IX18 779 aaKnown RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 CHCHD4Q8N4Q1 142 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 WDTC1Q8N5D0 677 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 ZNF557Q8N988 423 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 GATA6Q92908 595 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 CPXM1Q96SM3 734 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 PCED1AQ9H1Q7 454 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 THAP9Q9H5L6 903 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 GAREM1Q9H706 876 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 FNDC3AQ9Y2H6 1198 aaKnown RBP16.57■□□□□ 0.24
SGMS1-209ENST00000609445 ZZEF1O43149 2961 aa16.57■□□□□ 0.24
SGMS1-209ENST00000609445 PLXNA2O75051 1894 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 SYNJ2BP-COX16A0A087WUM0 186 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 TTC34A8MYJ7 566 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 H0Y626 953 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 FSBPO95073 299 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 LUC7L3O95232 432 aaKnown RBP16.56■□□□□ 0.24
SGMS1-209ENST00000609445 ASLP04424 464 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 ST8SIA6P61647 398 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 UBE2HP62256 183 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 YWHAZP63104 245 aaKnown RBP16.56■□□□□ 0.24
SGMS1-209ENST00000609445 ZBTB16Q05516 673 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 TRIP6Q15654 476 aaKnown RBP16.56■□□□□ 0.24
SGMS1-209ENST00000609445 HNRNPA1L2Q32P51 320 aaKnown RBP16.56■□□□□ 0.24
SGMS1-209ENST00000609445 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 CIR1Q86X95 450 aaPredicted RBP16.56■□□□□ 0.24
SGMS1-209ENST00000609445 APCDD1Q8J025 514 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 SHC3Q92529 594 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 BIRC7Q96CA5 298 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 BTBD1Q9H0C5 482 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 RSPH9Q9H1X1 276 aaPredicted RBP16.56■□□□□ 0.24
SGMS1-209ENST00000609445 COX16Q9P0S2 106 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 APEX2Q9UBZ4 518 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 ZMIZ1Q9ULJ6 1067 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 ERVW-1Q9UQF0 538 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.56■□□□□ 0.24
SGMS1-209ENST00000609445 PKD1L2Q7Z442 2459 aa16.56■□□□□ 0.24
SGMS1-209ENST00000609445 ZFYVE26Q68DK2 2539 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 GRAP2O75791 330 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 PNMA6AP0CW24 399 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-209ENST00000609445 PON1P27169 355 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 MATKP42679 507 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 MTIF2P46199 727 aaKnown RBP16.55■□□□□ 0.24
SGMS1-209ENST00000609445 EIF4EBP2Q13542 120 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-209ENST00000609445 EXOC3L4Q17RC7 722 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 HLA-BQ31612 363 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-209ENST00000609445 CCDC117Q8IWD4 279 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-209ENST00000609445 DEFB106AQ8N104 65 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 PNPLA1Q8N8W4 532 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 ATP6V0D2Q8N8Y2 350 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 GANCQ8TET4 914 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 BTN2A3PQ96KV6 586 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 RPL10LQ96L21 214 aaKnown RBP16.55■□□□□ 0.24
SGMS1-209ENST00000609445 TRIM62Q9BVG3 475 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 PABPC3Q9H361 631 aaKnown RBP16.55■□□□□ 0.24
SGMS1-209ENST00000609445 FAM204AQ9H8W3 233 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 TM9SF3Q9HD45 589 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 SIX2Q9NPC8 291 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 SERGEFQ9UGK8 458 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 SLCO3A1Q9UIG8 710 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 NEUROG3Q9Y4Z2 214 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 PCDHB9Q9Y5E1 797 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 FAM208BQ5VWN6 2430 aa16.55■□□□□ 0.24
SGMS1-209ENST00000609445 MID1O15344 667 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 CER1O95813 267 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 STK19P49842 368 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-209ENST00000609445 HNRNPDQ14103 355 aaKnown RBP16.54■□□□□ 0.24
SGMS1-209ENST00000609445 KIF19Q2TAC6 998 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 C9orf64Q5T6V5 341 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 C1orf131Q8NDD1 294 aaKnown RBP16.54■□□□□ 0.24
SGMS1-209ENST00000609445 SETD7Q8WTS6 366 aaKnown RBP16.54■□□□□ 0.24
SGMS1-209ENST00000609445 PPP1R13BQ96KQ4 1090 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms