RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 SLC2A14Q8TDB8 520 aa9.68□□□□□ -0.86
CTCFL-220ENST00000608858 RSPH9Q9H1X1 276 aaPredicted RBP9.68□□□□□ -0.86
CTCFL-220ENST00000608858 FBXO44Q9H4M3 255 aa9.68□□□□□ -0.86
CTCFL-220ENST00000608858 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF71Q9NQZ8 489 aaPredicted RBP9.68□□□□□ -0.86
CTCFL-220ENST00000608858 FAM49BQ9NUQ9 324 aa9.68□□□□□ -0.86
CTCFL-220ENST00000608858 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTCFL-220ENST00000608858 COMMD8Q9NX08 183 aa9.68□□□□□ -0.86
CTCFL-220ENST00000608858 ARHGAP20Q9P2F6 1191 aa9.68□□□□□ -0.86
CTCFL-220ENST00000608858 SEL1LQ9UBV2 794 aa9.68□□□□□ -0.86
CTCFL-220ENST00000608858 ATXN7L1Q9ULK2 861 aaPredicted RBP9.68□□□□□ -0.86
CTCFL-220ENST00000608858 ATP8B3O60423 1300 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 LY6G6EA0A0G2JKS1 128 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 SLC12A8A0AV02 714 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 A1L4Q6 167 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 RNASEH1O60930 286 aaKnown RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 RTN2O75298 545 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 GCNT3O95395 438 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 ITGB2P05107 769 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 DLATP10515 647 aaKnown RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 HGFP14210 728 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 TNNI1P19237 187 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 POLR2EP19388 210 aaKnown RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 WT1P19544 449 aaPredicted RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 CD70P32970 193 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 PRPHP41219 470 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 PSMD8P48556 350 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 CCR5P51681 352 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 CASP5P51878 434 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 DSG2Q14126 1118 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 ANKRD1Q15327 319 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 E2F5Q15329 346 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF787Q6DD87 383 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 SCARA5Q6ZMJ2 495 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 PRPF39Q86UA1 669 aaKnown RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 SRRM1Q8IYB3 904 aaKnown RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 GPD1LQ8N335 351 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 AADATQ8N5Z0 425 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 RASSF8Q8NHQ8 419 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 RAD54LQ92698 747 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 GOLGA1Q92805 767 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 CCDC127Q96BQ5 260 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 KLHDC7BQ96G42 594 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 CALML4Q96GE6 196 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 SMARCD1Q96GM5 515 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 FAM129BQ96TA1 746 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 FGFBP2Q9BYJ0 223 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 SLC2A11Q9BYW1 496 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 SYNDIG1Q9H7V2 258 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 GEMIN8Q9NWZ8 242 aaKnown RBP9.67□□□□□ -0.86
CTCFL-220ENST00000608858 GGA2Q9UJY4 613 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 EXOC7Q9UPT5 735 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 SCML2Q9UQR0 700 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF510Q9Y2H8 683 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 U3KQA8 63 aa9.67□□□□□ -0.86
CTCFL-220ENST00000608858 FBN2P35556 2912 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 ITPR3Q14573 2671 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF233A6NK53 670 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 TTC34A8MYJ7 566 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 SLC31A1O15431 190 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 ATP5BP06576 529 aaKnown RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 DLDP09622 509 aaKnown RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 GARTP22102 1010 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 HOXD9P28356 352 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 UBA7P41226 1012 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 SGSHP51688 502 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 METAP1P53582 386 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 COG7P83436 770 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 TRPC3Q13507 836 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 C9orf64Q5T6V5 341 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 L1TD1Q5T7N2 865 aaKnown RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 NAPEPLDQ6IQ20 393 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 GUSBP11Q6P575 273 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 EFL1Q7Z2Z2 1120 aaKnown RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 C14orf80Q86SX3 495 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 WDR36Q8NI36 951 aaKnown RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF564Q8TBZ8 553 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 WFDC5Q8TCV5 224 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 HTR3CQ8WXA8 447 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 JPH3Q8WXH2 748 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF516Q92618 1163 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 HPS3Q969F9 1004 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 TMA16Q96EY4 203 aaKnown RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 STRA6Q9BX79 667 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 SDCBP2Q9H190 292 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 ST6GALNAC4Q9H4F1 302 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 STIM2Q9P246 746 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 LRBAP50851 2863 aa9.66□□□□□ -0.86
CTCFL-220ENST00000608858 SPTBN1Q01082 2364 aaKnown RBP9.66□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-220ENST00000608858 GOLGA6L7A0A1B0GV03 622 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 HHLA1C9JL84 531 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 K7ESM1 405 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 IL1BP01584 269 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 RALAP11233 206 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 PABPC1P11940 636 aaKnown RBP9.65□□□□□ -0.86
CTCFL-220ENST00000608858 GOT1P17174 413 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 ABCD1P33897 745 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms