RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 USP17L7P0C7H9 530 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 RARAP10276 462 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 UNGP13051 313 aaPredicted RBP10.95□□□□□ -0.66
LINC01001-203ENST00000607448 KRT5P13647 590 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 HDCP19113 662 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 ITIH2P19823 946 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 RPS9P46781 194 aaKnown RBP10.95□□□□□ -0.66
LINC01001-203ENST00000607448 MAP3K7CLP57077 242 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 CALCOCO2Q13137 446 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 ZNF268Q14587 947 aaPredicted RBP10.95□□□□□ -0.66
LINC01001-203ENST00000607448 SKIDA1Q1XH10 827 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 TTC27Q6P3X3 843 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 C6orf89Q6UWU4 347 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 Q6ZS52 159 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 CLEC20AQ6ZU45 233 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 CEP128Q6ZU80 1094 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 UNC93AQ86WB7 457 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 MCOLN2Q8IZK6 566 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 NUP93Q8N1F7 819 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 FBXO25Q8TCJ0 367 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 SH3RF2Q8TEC5 729 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 CYFIP2Q96F07 1278 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 SMARCD1Q96GM5 515 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 VCPIP1Q96JH7 1222 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 CEP295NLQ96MC4 621 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 IMPG2Q9BZV3 1241 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 ACTR5Q9H9F9 607 aaPredicted RBP10.95□□□□□ -0.66
LINC01001-203ENST00000607448 KIF9Q9HAQ2 790 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 LMAN1LQ9HAT1 526 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 CSNK1G1Q9HCP0 422 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 DMAP1Q9NPF5 467 aaPredicted RBP10.95□□□□□ -0.66
LINC01001-203ENST00000607448 PPANQ9NQ55 473 aaKnown RBP10.95□□□□□ -0.66
LINC01001-203ENST00000607448 TRPM5Q9NZQ8 1165 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 CHORDC1Q9UHD1 332 aaPredicted RBP10.95□□□□□ -0.66
LINC01001-203ENST00000607448 ZMYM5Q9UJ78 669 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
LINC01001-203ENST00000607448 HHLA1C9JL84 531 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 RGS16O15492 202 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 OLFM2O95897 454 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CYP1A1P04798 512 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 YWHAQP27348 245 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CENPCQ03188 943 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 RUNX3Q13761 415 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 PPP1R7Q15435 360 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 AADACL2Q6P093 401 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 TAX1BP1Q86VP1 789 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 BBOF1Q8ND07 529 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 RAPGEF5Q92565 580 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 FBXO32Q969P5 355 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 NELL2Q99435 816 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 IRF2BPLQ9H1B7 796 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 LINC00597Q9H2U6 94 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CHRDQ9H2X0 955 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 RABEP2Q9H5N1 569 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 FBRSL1Q9HCM7 1045 aaKnown RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 THG1LQ9NWX6 298 aaKnown RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 SMPD4Q9NXE4 827 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 IL37Q9NZH6 218 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 MRPS17Q9Y2R5 130 aaKnown RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 FAM92AA1XBS5 289 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 PRR23AA6NEV1 266 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 ANTXRLA6NF34 631 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 LEFTY2O00292 366 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 RIPK2O43353 540 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 LAMTOR5O43504 91 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 PSTPIP1O43586 416 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 GFRA3O60609 400 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 GAS8O95995 478 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 TBXAS1P24557 533 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 ATP5DP30049 168 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 MMP13P45452 471 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 LIG3P49916 1009 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 SEC24CP53992 1094 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 MLLT6P55198 1093 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CSTF1Q05048 431 aaKnown RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 PTK6Q13882 451 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CCINQ13939 588 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 EML3Q32P44 896 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 ITPRIPL2Q3MIP1 535 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 SGO2Q562F6 1265 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 ERMARDQ5T6L9 678 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 PKN3Q6P5Z2 889 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 TAOK1Q7L7X3 1001 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 RALGPS2Q86X27 583 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CACNA2D3Q8IZS8 1091 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 SLC4A11Q8NBS3 891 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 OSCP1Q8WVF1 389 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 ZFRQ96KR1 1074 aaKnown RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 SLITRK1Q96PX8 696 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 XPO6Q96QU8 1125 aaKnown RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 NT5C1AQ9BXI3 368 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 C8orf33Q9H7E9 229 aaPredicted RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CCSER2Q9H7U1 834 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CYP3A43Q9HB55 503 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 MRPL47Q9HD33 250 aaKnown RBP10.94□□□□□ -0.66
LINC01001-203ENST00000607448 CISHQ9NSE2 258 aa10.94□□□□□ -0.66
LINC01001-203ENST00000607448 OSER1Q9NX31 292 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms