RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 NPY6RQ99463 290 aa12.72□□□□□ -0.37
CTSA-210ENST00000606000 DDX50Q9BQ39 737 aaKnown RBP12.72□□□□□ -0.37
CTSA-210ENST00000606000 FUCA2Q9BTY2 467 aa12.72□□□□□ -0.37
CTSA-210ENST00000606000 RAB6CQ9H0N0 254 aa12.72□□□□□ -0.37
CTSA-210ENST00000606000 TMEM245Q9H330 911 aa12.72□□□□□ -0.37
CTSA-210ENST00000606000 PRDM16Q9HAZ2 1276 aa12.72□□□□□ -0.37
CTSA-210ENST00000606000 FSCN3Q9NQT6 498 aa12.72□□□□□ -0.37
CTSA-210ENST00000606000 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTSA-210ENST00000606000 ADAMTS9Q9P2N4 1935 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 LNP1A1A4G5 178 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 TYW5A2RUC4 315 aaKnown RBP12.71□□□□□ -0.37
CTSA-210ENST00000606000 F5H5T6 163 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 H0Y626 953 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 SYNCRIPO60506 623 aaKnown RBP12.71□□□□□ -0.37
CTSA-210ENST00000606000 ADCY5O95622 1261 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 LSM8O95777 96 aaKnown RBP12.71□□□□□ -0.37
CTSA-210ENST00000606000 CYP1A1P04798 512 aaPredicted RBP12.71□□□□□ -0.37
CTSA-210ENST00000606000 ABCB4P21439 1286 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 ITPKAP23677 461 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 CCR1P32246 355 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 NOS2P35228 1153 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 CSKP41240 450 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 MATKP42679 507 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 CDR2Q01850 454 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 PITRM1Q5JRX3 1037 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 SMYD5Q6GMV2 418 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 FBXL22Q6P050 247 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 C14orf80Q86SX3 495 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 TMPRSS6Q8IU80 811 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 EMC1Q8N766 993 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 ANKRD20A12PQ8NF67 263 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 NEK11Q8NG66 645 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 OR52K2Q8NGK3 314 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 SLC30A5Q8TAD4 765 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 NETO1Q8TDF5 533 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 MRGPRX3Q96LB0 322 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 CFAP57Q96MR6 1250 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 ERGIC2Q96RQ1 377 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 EDEM2Q9BV94 578 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
CTSA-210ENST00000606000 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.372e-6■■□□□ 12.2
CTSA-210ENST00000606000 VANGL2Q9ULK5 521 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 HS3ST4Q9Y661 456 aa12.71□□□□□ -0.37
CTSA-210ENST00000606000 ZNF292O60281 2723 aa12.71□□□□□ -0.38
CTSA-210ENST00000606000 RIF1Q5UIP0 2472 aaKnown RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 SYCE3A1L190 88 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 LRRC10BA6NIK2 292 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 SLC30A4O14863 429 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 NPC1O15118 1278 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 ZBTB24O43167 697 aaPredicted RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 TIMM44O43615 452 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 PAGE1O75459 146 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 DLDP09622 509 aaKnown RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 MZF1P28698 734 aaPredicted RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 STAT1P42224 750 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 CAMK2GQ13555 558 aaPredicted RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 AUHQ13825 339 aaKnown RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 CXorf57Q6NSI4 855 aaKnown RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 FAM124AQ86V42 546 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 CCAR2Q8N163 923 aaKnown RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 OR2T3Q8NH03 318 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 SIPA1Q96FS4 1042 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 HSPA12BQ96MM6 686 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 IRX2Q9BZI1 471 aaPredicted RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 TKTL2Q9H0I9 626 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 SIK2Q9H0K1 926 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 PRSS16Q9NQE7 514 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 TMEM59LQ9UK28 342 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
CTSA-210ENST00000606000 DNAH14Q0VDD8 3507 aa12.7□□□□□ -0.38
CTSA-210ENST00000606000 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 AP5Z1O43299 807 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 ZNF217O75362 1048 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 ATP5BP06576 529 aaKnown RBP12.69□□□□□ -0.38
CTSA-210ENST00000606000 SLC2A3P11169 496 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 PDGFRAP16234 1089 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 MAOBP27338 520 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 CXCR3P49682 368 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 STK19P49842 368 aaPredicted RBP12.69□□□□□ -0.38
CTSA-210ENST00000606000 TPMTP51580 245 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 SNX16P57768 344 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 IRX4P78413 519 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 DEUP1Q05D60 604 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 ZNF33AQ06730 810 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 PTP4A2Q12974 167 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 BYSLQ13895 437 aaKnown RBP12.69□□□□□ -0.38
CTSA-210ENST00000606000 PLEKHG6Q3KR16 790 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 STPG1Q5TH74 334 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 SLC36A4Q6YBV0 504 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 ZNF677Q86XU0 584 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 JOSD2Q8TAC2 188 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 PRCCQ92733 491 aaPredicted RBP12.69□□□□□ -0.38
CTSA-210ENST00000606000 NT5C3BQ969T7 300 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 TTC17Q96AE7 1141 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 TOE1Q96GM8 510 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms