RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 KIAA1211LQ6NV74 962 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 LRSAM1Q6UWE0 723 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 KIAA1324Q6UXG2 1013 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 CYP2U1Q7Z449 544 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 RABEPKQ7Z6M1 372 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 PHF13Q86YI8 300 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 CFAP52Q8N1V2 620 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 PRCCQ92733 491 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 TTC17Q96AE7 1141 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 MRGPRX1Q96LB2 322 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 C1orf74Q96LT6 269 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 PRMT1Q99873 361 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 SELENOOQ9BVL4 669 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 ARRDC1-AS1Q9H2J1 176 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 PRDM16Q9HAZ2 1276 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 PIGVQ9NUD9 493 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 ARHGEF38Q9NXL2 777 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 XPO7Q9UIA9 1087 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 TMEM59LQ9UK28 342 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 INVSQ9Y283 1065 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 RAD54BQ9Y620 910 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 VPS13AQ96RL7 3174 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 WASH3PC4AMC7 463 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 DCLK1O15075 740 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 TEX33O43247 280 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 PAGE1O75459 146 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CLDN11O75508 207 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 KRT3P12035 628 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 PDGFRAP16234 1089 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 OXTRP30559 389 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CD70P32970 193 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 HOXD12P35452 270 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 ID4P47928 161 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 DHPSP49366 369 aaPredicted RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 UBASH3AP57075 661 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CREB5Q02930 508 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 ZBTB16Q05516 673 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 ZNF177Q13360 481 aaPredicted RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CAMK2GQ13555 558 aaPredicted RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 NR1I3Q14994 352 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 ASIC2Q16515 512 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 MAP7D1Q3KQU3 841 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 FIGNQ5HY92 759 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 SFMBT2Q5VUG0 894 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 FBXL22Q6P050 247 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 PRR23CQ6ZRP0 262 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 LUZP1Q86V48 1076 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 TMPRSS6Q8IU80 811 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CCAR2Q8N163 923 aaKnown RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 C3orf20Q8ND61 904 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 OR2T3Q8NH03 318 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 SLC30A5Q8TAD4 765 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CYB5D2Q8WUJ1 264 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 RLN3Q8WXF3 142 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 SORCS1Q8WY21 1168 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 SIPA1Q96FS4 1042 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 VCPIP1Q96JH7 1222 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 HAPLN3Q96S86 360 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 TBCBQ99426 244 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 TMEM245Q9H330 911 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CD248Q9HCU0 757 aa11.92□□□□□ -0.5
CCDC12-209ENST00000604164 METTL5Q9NRN9 209 aaKnown RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 RIF1Q5UIP0 2472 aaKnown RBP11.92□□□□□ -0.5
CCDC12-209ENST00000604164 BCLAF3A2AJT9 711 aaKnown RBP11.91□□□□□ -0.5
CCDC12-209ENST00000604164 RNASEH1O60930 286 aaKnown RBP11.91□□□□□ -0.5
CCDC12-209ENST00000604164 PRKCHP24723 683 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 FLT3P36888 993 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 CSKP41240 450 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 PTPN9P43378 593 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 PLK1P53350 603 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 CDH4P55283 916 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 FANCCQ00597 558 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 ECT2LQ008S8 904 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 RPL6Q02878 288 aaKnown RBP11.91□□□□□ -0.5
CCDC12-209ENST00000604164 PUM1Q14671 1186 aaKnown RBP eCLIP11.91□□□□□ -0.55e-9■□□□□ 8.1
CCDC12-209ENST00000604164 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 PLEKHG6Q3KR16 790 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 C5orf22Q49AR2 442 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 AASDHQ4L235 1098 aaPredicted RBP11.91□□□□□ -0.5
CCDC12-209ENST00000604164 PITRM1Q5JRX3 1037 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 SYCP2LQ5T4T6 812 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 ACAD10Q6JQN1 1059 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 DNAJC24Q6P3W2 148 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 STRADAQ7RTN6 431 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 WFDC5Q8TCV5 224 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 NETO1Q8TDF5 533 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 BAP1Q92560 729 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 FOXJ1Q92949 421 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 LMLNQ96KR4 655 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 SIK2Q9H0K1 926 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 RETREG1Q9H6L5 497 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 AIPL1Q9NZN9 384 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 VANGL2Q9ULK5 521 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms