RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GKN1Q9NS71 199 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 GRHL1Q9NZI5 618 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 NEU3Q9UQ49 428 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 HCFC2Q9Y5Z7 792 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 A0A1W2PRU2 124 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 F5H5T6 163 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 ZSCAN5DPP0CG00 497 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 ETS1P14921 441 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 EPHA5P54756 1037 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 CYP4F8P98187 520 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 CAV1Q03135 178 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 GPS1Q13098 491 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 B4GALNT4Q76KP1 1039 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 PRUNE1Q86TP1 453 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 DENND1CQ8IV53 801 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 RTL3Q8N8U3 475 aaKnown RBP18.52■□□□□ 0.56
VRK3-225ENST00000601912 MAB21L3Q8N8X9 362 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 GLIS1Q8NBF1 620 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 CCNYQ8ND76 341 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 GDPD5Q8WTR4 605 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 CYP2S1Q96SQ9 504 aa18.52■□□□□ 0.56
VRK3-225ENST00000601912 DDX50Q9BQ39 737 aaKnown RBP18.52■□□□□ 0.56
VRK3-225ENST00000601912 MTRF1LQ9UGC7 380 aaKnown RBP18.52■□□□□ 0.56
VRK3-225ENST00000601912 ANAPC1Q9H1A4 1944 aa18.52■□□□□ 0.55
VRK3-225ENST00000601912 IGLV3-10A0A075B6K4 115 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 TRAV19A0A0A6YYK7 116 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 WASH4PA8MWX3 477 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 SEC31AO94979 1220 aaKnown RBP18.51■□□□□ 0.55
VRK3-225ENST00000601912 IRF1P10914 325 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 RHOQP17081 205 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 TACR2P21452 398 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 IVDP26440 423 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 ECHS1P30084 290 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 CORO1AP31146 461 aaKnown RBP18.51■□□□□ 0.55
VRK3-225ENST00000601912 TNNT3P45378 269 aaPredicted RBP18.51■□□□□ 0.55
VRK3-225ENST00000601912 SMAD3P84022 425 aaKnown RBP18.51■□□□□ 0.55
VRK3-225ENST00000601912 AP1B1Q10567 949 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 P3H1Q32P28 736 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 FBXL22Q6P050 247 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 ADGRD2Q7Z7M1 963 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 ZNF683Q8IZ20 524 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 CCDC33Q8N5R6 958 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 NPWQ8N729 165 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 ART4Q93070 314 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 PPP2R3CQ969Q6 453 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 RTP4Q96DX8 246 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 RPRD1AQ96P16 312 aaPredicted RBP18.51■□□□□ 0.55
VRK3-225ENST00000601912 FMO2Q99518 471 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 PRMT1Q99873 361 aaKnown RBP18.51■□□□□ 0.55
VRK3-225ENST00000601912 PRDM12Q9H4Q4 367 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 SMPD4Q9NXE4 827 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 MPP6Q9NZW5 540 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 ANAPC5Q9UJX4 755 aa18.51■□□□□ 0.55
VRK3-225ENST00000601912 DRGXA6NNA5 263 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 STK10O94804 968 aaKnown RBP18.5■□□□□ 0.55
VRK3-225ENST00000601912 CKMP06732 381 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 POU2F2P09086 479 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 DDX6P26196 483 aaKnown RBP eCLIP18.5■□□□□ 0.55
VRK3-225ENST00000601912 DUSP6Q16828 381 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 ARHGAP15Q53QZ3 475 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 IZUMO3Q5VZ72 239 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 NADSYN1Q6IA69 706 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 C4orf22Q6V702 233 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 PCGF5Q86SE9 256 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 FBXO25Q8TCJ0 367 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 HTR3CQ8WXA8 447 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 CAVIN3Q969G5 261 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 TIFAQ96CG3 184 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 SLC22A12Q96S37 553 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 LGMNQ99538 433 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 PRKD2Q9BZL6 878 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 ZDHHC18Q9NUE0 388 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 HCFC1R1Q9NWW0 138 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 PAK5Q9P286 719 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 DNMT3BQ9UBC3 853 aaKnown RBP18.5■□□□□ 0.55
VRK3-225ENST00000601912 CCDC195A0A1B0GUA6 201 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 LATS1O95835 1130 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 RHOP08100 348 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 RPL22P35268 128 aaKnown RBP18.5■□□□□ 0.55
VRK3-225ENST00000601912 NRIP1P48552 1158 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 ITGA8P53708 1063 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 SLC7A9P82251 487 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 GALNT2Q10471 571 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 PRKD1Q15139 912 aaPredicted RBP18.5■□□□□ 0.55
VRK3-225ENST00000601912 ZDHHC24Q6UX98 284 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 HDXQ7Z353 690 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 CDCA3Q99618 268 aaPredicted RBP18.5■□□□□ 0.55
VRK3-225ENST00000601912 NEUROG2Q9H2A3 272 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 RETREG1Q9H6L5 497 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 TMEM248Q9NWD8 314 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
VRK3-225ENST00000601912 CPQQ9Y646 472 aa18.5■□□□□ 0.55
VRK3-225ENST00000601912 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 DNALI1O14645 258 aaPredicted RBP18.49■□□□□ 0.55
VRK3-225ENST00000601912 MTSS1O43312 755 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 KLKB1P03952 638 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 GJA1P17302 382 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 GARSP41250 739 aaKnown RBP18.49■□□□□ 0.55
VRK3-225ENST00000601912 RABGAP1LQ5R372 815 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 ARTNQ5T4W7 220 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms