RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	RAB41	Q5JT25	222 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	FAM26F	Q5R3K3	315 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	NAPEPLD	Q6IQ20	393 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	OR4C6	Q8NH72	309 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	TTC17	Q96AE7	1141 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	FAM131C	Q96AQ9	280 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	TMA16	Q96EY4	203 aa	Known RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	PRR11	Q96HE9	360 aa	Predicted RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	TMX3	Q96JJ7	454 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	FAM129B	Q96TA1	746 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	APOBEC3G	Q9HC16	384 aa	Known RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	KBTBD4	Q9NVX7	518 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	UCKL1	Q9NWZ5	548 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	STRIP2	Q9ULQ0	834 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	UBE4B	O95155	1302 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	PMS2P1	A4D2B8	440 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	EFS	O43281	561 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	CLSTN1	O94985	981 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	CKMT1A	P12532	417 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	MYF5	P13349	255 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	P4HA1	P13674	534 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	POLR2E	P19388	210 aa	Known RBP	11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	DGKA	P23743	735 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	SLC8A1	P32418	973 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	DRD3	P35462	400 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	METAP1	P53582	386 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	AP3M2	P53677	418 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	YWHAG	P61981	247 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	NFKB2	Q00653	900 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	E2F4	Q16254	413 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	SGSM1	Q2NKQ1	1148 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	LINC00303	Q3SY05	128 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	C1orf220	Q5T0J3	134 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	ADGRF1	Q5T601	910 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	CNNM4	Q6P4Q7	775 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	RSRC2	Q7L4I2	434 aa	Known RBP	11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	IQCH	Q86VS3	1027 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	PDILT	Q8N807	584 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	NDRG1	Q92597	394 aa	Known RBP	11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	DEPDC7	Q96QD5	511 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	OMD	Q99983	421 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	NT5C1A	Q9BXI3	368 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	TNMD	Q9H2S6	317 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	THSD1	Q9NS62	852 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	STARD5	Q9NSY2	213 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	CA5B	Q9Y2D0	317 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	NBAS	A2RRP1	2371 aa		11.48	□□□□□ -0.57
NUP62-222	ENST00000600935	ITIH6	Q6UXX5	1313 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	CDRT15L2	A8MXV6	281 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	TTC34	A8MYJ7	566 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	EXOC3	O60645	756 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	KIF20A	O95235	890 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	LATS1	O95835	1130 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	RPN1	P04843	607 aa	Known RBP	11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	GOT1	P17174	413 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	ITGB6	P18564	788 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	SLC6A4	P31645	630 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	CSK	P41240	450 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	CTSO	P43234	321 aa	Predicted RBP	11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	PSMD8	P48556	350 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	HARS2	P49590	506 aa	Known RBP	11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	ZNF445	P59923	1031 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	DAB2	P98082	770 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	CLN3	Q13286	438 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	ARL13B	Q3SXY8	428 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	SLC45A4	Q5BKX6	768 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	FAM133B	Q5BKY9	247 aa	Known RBP	11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	PIK3R6	Q5UE93	754 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	PM20D1	Q6GTS8	502 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	FAM173B	Q6P4H8	233 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	RFWD3	Q6PCD5	774 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	SV2A	Q7L0J3	742 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	TMC6	Q7Z403	805 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	PIGZ	Q86VD9	579 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	OR14C36	Q8NHC7	312 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	TAF4B	Q92750	862 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	MYEOV	Q96EZ4	313 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	SLC46A1	Q96NT5	459 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	DMAC2	Q9NW81	257 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	TJP2	Q9UDY2	1190 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	SFMBT1	Q9UHJ3	866 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	CYTH4	Q9UIA0	394 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	SATB2	Q9UPW6	733 aa		11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	HBS1L	Q9Y450	684 aa	Known RBP	11.47	□□□□□ -0.57
NUP62-222	ENST00000600935	ITPR2	Q14571	2701 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	RP1	P56715	2156 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	GOLGA6L7	A0A1B0GV03	622 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	TULP2	O00295	520 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	MSI1	O43347	362 aa	Known RBP	11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	TBL1X	O60907	577 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	RNASEH1	O60930	286 aa	Known RBP	11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	HLA-DRA	P01903	254 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	NTRK1	P04629	796 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	GP1BA	P07359	652 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	MAT2A	P31153	395 aa	Known RBP	11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	ASIC1	P78348	528 aa		11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	SFSWAP	Q12872	951 aa	Known RBP	11.46	□□□□□ -0.57
NUP62-222	ENST00000600935	OVGP1	Q12889	678 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms