RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 USP12O75317 370 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 PROCP04070 461 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 TYK2P29597 1187 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 PEX19P40855 299 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 GLUD2P49448 558 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 SLC25A3Q00325 362 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 SOX4Q06945 474 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 DBN1Q16643 649 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 RSPH3Q86UC2 560 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 GPRC5AQ8NFJ5 357 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 FCRL3Q96P31 734 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 RNF39Q9H2S5 420 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 DNAH12Q6ZR08 3092 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 MAP3K7O43318 606 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 SERPINE1P05121 402 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 ATP5BP06576 529 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 ANPEPP15144 967 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 VWA5B1Q5TIE3 1220 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 SYPL2Q5VXT5 272 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 IRGCQ6NXR0 463 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 AGAP3Q96P47 875 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 C1orf21Q9H246 121 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 TXNDC16Q9P2K2 825 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 SOX13Q9UN79 622 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 APOBEC2Q9Y235 224 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 M0QYT0 321 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 XPO1O14980 1071 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 SIN3BO75182 1162 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 R3HDM1Q15032 1099 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 PDK1Q15118 436 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 C6orf163Q5TEZ5 329 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 OSTM1Q86WC4 334 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 MYLK4Q86YV6 388 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 CCNJLQ8IV13 435 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 OR52K1Q8NGK4 314 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 CERS2Q96G23 380 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 SIKE1Q9BRV8 207 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 DLGAP2Q9P1A6 1054 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 COPG2Q9UBF2 871 aa20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-225ENST00000600733 A0A088AWK7 358 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 POLBP06746 335 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 ACAT1P24752 427 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 IFRD2Q12894 506 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 PID1Q7Z2X4 250 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 TNS4Q8IZW8 715 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 B3GALNT2Q8NCR0 500 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 GSTCDQ8NEC7 633 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 OR6J1Q8NGC5 347 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 TTC1Q99614 292 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 ZNF184Q99676 751 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 SHCBP1LQ9BZQ2 653 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 PIGVQ9NUD9 493 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 GDAP2Q9NXN4 497 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 ANGPTL2Q9UKU9 493 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 FAM72CH0Y354 149 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 MAP3K13O43283 966 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 DAB1O75553 588 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 IDH3AP50213 366 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 RABGGTBP53611 331 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 ITGA9Q13797 1035 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 DGKDQ16760 1214 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 FAM72AQ5TYM5 149 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 FAM72DQ6L9T8 149 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 HFE2Q6ZVN8 426 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 FAM72BQ86X60 149 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 RNF169Q8NCN4 708 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 PPP4R1Q8TF05 950 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 AZIN2Q96A70 460 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 NAT9Q9BTE0 207 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 SNX15Q9NRS6 342 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 PPM1HQ9ULR3 514 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 SORCS3Q9UPU3 1222 aa20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 PIN4Q9Y237 131 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-225ENST00000600733 CENPFP49454 3210 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 EEF2KO00418 725 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 USP1O94782 785 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 CD4P01730 458 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 GP5P40197 560 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 TAF6P49848 677 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 NAB1Q13506 487 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 DPYSQ14117 519 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 RALGPS1Q5JS13 557 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 ADAM32Q8TC27 787 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 TMEM40Q8WWA1 233 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 NT5C3BQ969T7 300 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 ZNF560Q96MR9 790 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 NPY6RQ99463 290 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 FERMT1Q9BQL6 677 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 GORASP1Q9BQQ3 440 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 DUSP16Q9BY84 665 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 MAGED2Q9UNF1 606 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 PPP1R12AO14974 1030 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 BAG2O95816 211 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 RALBP11234 206 aa20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 DARSP14868 501 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 SP100P23497 879 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-225ENST00000600733 YY1P25490 414 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms