RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ERVFC1P60507 584 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 NHLH1Q02575 133 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 EIF4EBP2Q13542 120 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 COL19A1Q14993 1142 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 PAFAH1B3Q15102 231 aaKnown RBP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 RAB6CQ53S08 254 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 SLC45A4Q5BKX6 768 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 HEATR6Q6AI08 1181 aaKnown RBP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 AZIN2Q96A70 460 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 SLC39A13Q96H72 371 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 FMO2Q99518 471 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 RAB6CQ9H0N0 254 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 DPH5Q9H2P9 285 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 OSER1Q9NX31 292 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 CLDND1Q9NY35 253 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 CALCOCO1Q9P1Z2 691 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 PAK5Q9P286 719 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 ANAPC5Q9UJX4 755 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 LSM7Q9UK45 103 aaKnown RBP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 FAM50BQ9Y247 325 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 TYW5A2RUC4 315 aaKnown RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ZNF197O14709 1029 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 MSI1O43347 362 aaKnown RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 LATS1O95835 1130 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 SPATA31D3P0C874 917 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ERCC2P18074 760 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 AMPD1P23109 780 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 LTBRP36941 435 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 CLCN4P51793 760 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 MRPS25P82663 173 aaKnown RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ZNF33AQ06730 810 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 DPYSQ14117 519 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 SLMAPQ14BN4 828 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 OASLQ15646 514 aaKnown RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 RABGAP1LQ5R372 815 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 SPATA31D4Q6ZUB0 917 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ZC3H18Q86VM9 953 aaKnown RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 DDX42Q86XP3 938 aaKnown RBP eCLIP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ADHFE1Q8IWW8 467 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ZDHHC14Q8IZN3 488 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 PQLC3Q8N755 202 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 CCNYQ8ND76 341 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 CASKIN2Q8WXE0 1202 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 CAVIN3Q969G5 261 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 PPP1R2P1Q96PQ5 205 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 CDCA3Q99618 268 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 HERPUD2Q9BSE4 406 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 TRIM51Q9BSJ1 452 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 FRMD8Q9BZ67 464 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 CCSER2Q9H7U1 834 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ZDHHC7Q9NXF8 308 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 PPARGC1AQ9UBK2 798 aaKnown RBP13.14□□□□□ -0.31
ZNF548-210ENST00000600442 NUDT5Q9UKK9 219 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 NFU1Q9UMS0 254 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 ZNF510Q9Y2H8 683 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 SNX24Q9Y343 169 aa13.14□□□□□ -0.31
ZNF548-210ENST00000600442 TRAV19A0A0A6YYK7 116 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 ESYT3A0FGR9 886 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 E9PAM4 449 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 F5H5T6 163 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 KCNN4O15554 427 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 COCHO43405 550 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 LRIG2O94898 1065 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 IGLV3-27P01718 113 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 PTPN2P17706 415 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 HDCP19113 662 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 IRS1P35568 1242 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 CARSP49589 748 aaKnown RBP13.13□□□□□ -0.31
ZNF548-210ENST00000600442 PLTPP55058 493 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 ADCY2Q08462 1091 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 GPS1Q13098 491 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 P3H1Q32P28 736 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 PPP1R21Q6ZMI0 780 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 ANKS1BQ7Z6G8 1248 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 CCDC117Q8IWD4 279 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-210ENST00000600442 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 FAM71DQ8N9W8 422 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 RUFY1Q96T51 708 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 ZYG11BQ9C0D3 744 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 KLC2Q9H0B6 622 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 KCNH6Q9H252 994 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 TLE6Q9H808 572 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 TRPC7Q9HCX4 862 aa13.13□□□□□ -0.31
ZNF548-210ENST00000600442 SAE1Q9UBE0 346 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-210ENST00000600442 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 HIDE1A8MVS5 230 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 DCLK1O15075 740 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 GRM6O15303 877 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 NEBLO76041 1014 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 TBX18O95935 607 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 CKMP06732 381 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 HMBSP08397 361 aa13.12□□□□□ -0.31
ZNF548-210ENST00000600442 POU2F2P09086 479 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms