RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ENTPD5O75356 428 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 FLT3LGP49771 235 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 SEPT6Q14141 434 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 DLG2Q15700 870 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 PCSK7Q16549 785 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 MORN1Q5T089 497 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 N4BP2L1Q5TBK1 243 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 NPWQ8N729 165 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 MZB1Q8WU39 189 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 MFSD3Q96ES6 412 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 FAXDC2Q96IV6 333 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 TBC1D10AQ9BXI6 508 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 OSBPL1AQ9BXW6 950 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 ARL8BQ9NVJ2 186 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 GDAP2Q9NXN4 497 aa11.84□□□□□ -0.51
ARHGEF1-220ENST00000600274 SPAG6O75602 509 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 KCNE1P15382 129 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 NR2C2P49116 596 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 TTC3P53804 2025 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 SATB1Q01826 763 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 ARL13BQ3SXY8 428 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 OTOP3Q7RTS5 596 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 METTL23Q86XA0 190 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 IPMKQ8NFU5 416 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 SPATA22Q8NHS9 363 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 NUDCD1Q96RS6 583 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 PLAC1Q9HBJ0 212 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 C15orf41Q9Y2V0 281 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.51
ARHGEF1-220ENST00000600274 A0A0G2JMZ2 1700 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 I6L893 689 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 SMAPO00193 183 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 GYG2O15488 501 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 PMPCBO75439 489 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 DAB1O75553 588 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 GCATO75600 419 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 CHRNA1P02708 482 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 NFKB1P19838 968 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 GLRBP48167 497 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 POLE2P56282 527 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 DAOAP59103 153 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 GALNTL6Q49A17 601 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 IL31Q6EBC2 164 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 AGMOQ6ZNB7 445 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 BZW1Q7L1Q6 419 aaKnown RBP11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 CLNKQ7Z7G1 428 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 TRPV1Q8NER1 839 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 TTC8Q8TAM2 541 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 PPCSQ9HAB8 311 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 XPNPEP3Q9NQH7 507 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 SIP14410 1827 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 MGRN1O60291 552 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 RFPL1O75677 317 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 CCNHP51946 323 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 POU6F1Q14863 301 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 CRYMQ14894 314 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 ARHGAP36Q6ZRI8 547 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 TFAP2DQ7Z6R9 452 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 CRLF3Q8IUI8 442 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 SPATA6LQ8N4H0 392 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 TOP6BLQ8N6T0 577 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZMIZ2Q8NF64 920 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 B3GALT6Q96L58 329 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 APBA2Q99767 749 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 MTG1Q9BT17 334 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 NMUR2Q9GZQ4 415 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 C20orf96Q9NUD7 363 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 TMLHEQ9NVH6 421 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 PCDHA11Q9Y5I1 949 aa11.83□□□□□ -0.52
ARHGEF1-220ENST00000600274 ARHGAP42A6NI28 874 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 KIF1CO43896 1103 aaKnown RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 ASGR1P07306 291 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 OR1G1P47890 313 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 FASTKD1Q53R41 847 aaKnown RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 OTUD1Q5VV17 481 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 TAF2Q6P1X5 1199 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 STRA8Q7Z7C7 330 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 GSTCDQ8NEC7 633 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 ATP2A3Q93084 1043 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 PPP1R10Q96QC0 940 aaKnown RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 RAB3IPQ96QF0 476 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 NPY6RQ99463 290 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 DHRS4Q9BTZ2 278 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 COLEC11Q9BWP8 271 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 CHRAC1Q9NRG0 131 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 BFARQ9NZS9 450 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 MPP6Q9NZW5 540 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 PLLPQ9Y342 182 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 FIS1Q9Y3D6 152 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 LOC285556D6RIA3 1793 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 MEI4A8MW99 385 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 FCHO1O14526 889 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 MGEA5O60502 916 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 DNAJC6O75061 913 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRIG2O94898 1065 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 MT-CYBP00156 380 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 FYNP06241 537 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms