RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 MBLAC2Q68D91 279 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 CRYBG2Q8N1P7 616 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 ZNF516Q92618 1163 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 SGF29Q96ES7 293 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 ATXN7L3BQ96GX2 97 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 SDCBP2Q9H190 292 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 VRTNQ9H8Y1 702 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 ABCB8Q9NUT2 735 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 UCKL1Q9NWZ5 548 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 TFIP11Q9UBB9 837 aaKnown RBP18.37■□□□□ 0.53
SSBP4-207ENST00000600244 GGA2Q9UJY4 613 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 PCDHA5Q9Y5H7 936 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 ENTPD2Q9Y5L3 495 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 U3KQA8 63 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 PMS2P1A4D2B8 440 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 MAGEC1O60732 1142 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 SIN3BO75182 1162 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 YEATS4O95619 227 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 ATP5BP06576 529 aaKnown RBP18.36■□□□□ 0.53
SSBP4-207ENST00000600244 PABPC1P11940 636 aaKnown RBP18.36■□□□□ 0.53
SSBP4-207ENST00000600244 MLLT3P42568 568 aaPredicted RBP18.36■□□□□ 0.53
SSBP4-207ENST00000600244 ALCAMQ13740 583 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 SLC39A14Q15043 492 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 BMT2Q1RMZ1 405 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 USP53Q70EK8 1073 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 AHI1Q8N157 1196 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 LINC00301Q8NCQ3 95 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 HPS3Q969F9 1004 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 OMDQ99983 421 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 ABCG4Q9H172 646 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 RASAL2Q9UJF2 1139 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
SSBP4-207ENST00000600244 SPTBN1Q01082 2364 aaKnown RBP18.35■□□□□ 0.53
SSBP4-207ENST00000600244 RNASEH1O60930 286 aaKnown RBP18.35■□□□□ 0.53
SSBP4-207ENST00000600244 GJB6O95452 261 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 DLATP10515 647 aaKnown RBP18.35■□□□□ 0.53
SSBP4-207ENST00000600244 RALAP11233 206 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 TNNI1P19237 187 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 SLC8A1P32418 973 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 HARS2P49590 506 aaKnown RBP18.35■□□□□ 0.53
SSBP4-207ENST00000600244 KIF11P52732 1056 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 ADPRHP54922 357 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 PPP2CBP62714 309 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 PPP2CAP67775 309 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 EFEMP1Q12805 493 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 HNRNPA1L2Q32P51 320 aaKnown RBP18.35■□□□□ 0.53
SSBP4-207ENST00000600244 HS1BP3Q53T59 392 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 CLEC20AQ6ZU45 233 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 CCDC186Q7Z3E2 898 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 AADATQ8N5Z0 425 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 SYAP1Q96A49 352 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-207ENST00000600244 APOLD1Q96LR9 279 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 CDK5RAP1Q96SZ6 601 aaKnown RBP18.35■□□□□ 0.53
SSBP4-207ENST00000600244 CGRRF1Q99675 332 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 KIAA1586Q9HCI6 787 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 RCOR1Q9UKL0 485 aa18.35■□□□□ 0.53
SSBP4-207ENST00000600244 DOPEY1Q5JWR5 2465 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 KIF26BQ2KJY2 2108 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 ABCA12Q86UK0 2595 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 NOBOXO60393 691 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 GOT1P17174 413 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 TGM2P21980 687 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 FOXK1P85037 733 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 TRPC3Q13507 836 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 ARID5BQ14865 1188 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 FOXD4L6Q3SYB3 417 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-207ENST00000600244 C9orf64Q5T6V5 341 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 FOXD4L3Q6VB84 417 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-207ENST00000600244 MMAAQ8IVH4 418 aaKnown RBP18.34■□□□□ 0.53
SSBP4-207ENST00000600244 ARL14Q8N4G2 192 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 C12orf29Q8N999 325 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 OR14C36Q8NHC7 312 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 MAPK15Q8TD08 544 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 PNPLA8Q9NP80 782 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 FBXO2Q9UK22 296 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-207ENST00000600244 CFAP45Q9UL16 551 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 USP3Q9Y6I4 520 aa18.34■□□□□ 0.53
SSBP4-207ENST00000600244 FFAR2O15552 330 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 PPFIA2O75334 1257 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 FAM200BP0CF97 657 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.52
SSBP4-207ENST00000600244 PSMD6Q15008 389 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.52
SSBP4-207ENST00000600244 PRPF39Q86UA1 669 aaKnown RBP18.33■□□□□ 0.52
SSBP4-207ENST00000600244 FAM26EQ8N5C1 309 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 JAKMIP2Q96AA8 810 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 FAM129BQ96TA1 746 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 SLC25A18Q9H1K4 315 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 USP29Q9HBJ7 922 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 FAM49BQ9NUQ9 324 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 KLHL11Q9NVR0 708 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.33■□□□□ 0.52
SSBP4-207ENST00000600244 MARCH2Q9P0N8 246 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 ICE1Q9Y2F5 2266 aa18.33■□□□□ 0.52
SSBP4-207ENST00000600244 FRMD3A2A2Y4 597 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 BLACEA4D250 179 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 PPP6R2O75170 966 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 KRT38O76015 456 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 TNFSF15O95150 251 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms