RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 TMEM110-MUSTN1A8MSY1 372 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 NPC1O15118 1278 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 NCAM2O15394 837 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 ADH5P11766 374 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 TCP1P17987 556 aaKnown RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 IL4RP24394 825 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 EPHB2P29323 1055 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 SLC6A4P31645 630 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 SERPINB6P35237 376 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 NR2C2P49116 596 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 NDST2P52849 883 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 CDH6P55285 790 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 TPI1P60174 286 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF177Q13360 481 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 TFDP3Q5H9I0 405 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 LY6G5CQ5SRR4 150 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 ARTNQ5T4W7 220 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 TMCO4Q5TGY1 634 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 RFX8Q6ZV50 586 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 NYAP1Q6ZVC0 841 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 KIAA0907Q7Z7F0 614 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 NLRP14Q86W24 1093 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 TMEM25Q86YD3 366 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 LGI2Q8N0V4 545 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 RTL3Q8N8U3 475 aaKnown RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 RIN3Q8TB24 985 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 WFIKKN2Q8TEU8 576 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 DDI1Q8WTU0 396 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 MAIP1Q8WWC4 291 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 ATRIPQ8WXE1 791 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 WBP2Q969T9 261 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 RPP25Q9BUL9 199 aaKnown RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 BBS2Q9BXC9 721 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 MAK16Q9BXY0 300 aaKnown RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 FRMD8P1Q9BZ68 369 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 BRD8Q9H0E9 1235 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 SIK2Q9H0K1 926 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 MAGEH1Q9H213 219 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 HPS4Q9NQG7 708 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 KIAA1522Q9P206 1035 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 TTC7AQ9ULT0 858 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 WNT6Q9Y6F9 365 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 KIF26AQ9ULI4 1882 aaPredicted RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 LRRD1A4D1F6 860 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 C3orf70A6NLC5 250 aaPredicted RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 TRDMT1O14717 391 aaKnown RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 DDX3YO15523 660 aaKnown RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 DAPK3O43293 454 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 LUC7L3O95232 432 aaKnown RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 CYP17A1P05093 508 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 TYRP14679 529 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 CDKN2BP42772 138 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 GNG11P61952 73 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 SLC20A2Q08357 652 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 DPYSQ14117 519 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 DPYSL3Q14195 570 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 EIF4HQ15056 248 aaKnown RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 RAB6CQ53S08 254 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 KCNT1Q5JUK3 1230 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 PAPD7Q5XG87 772 aaKnown RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 METTL3Q86U44 580 aaKnown RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 ETFBKMTQ8IXQ9 262 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 KDM1BQ8NB78 822 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 TTC13Q8NBP0 860 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 HSPH1Q92598 858 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 FATE1Q969F0 183 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 CSPG4P5Q96PW8 444 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 RNF157Q96PX1 679 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 KCTD15Q96SI1 283 aaPredicted RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 NAP1L3Q99457 506 aaPredicted RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 RAB6CQ9H0N0 254 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
TGFB1-204ENST00000600196 DEC1Q9P2X7 70 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 VANGL2Q9ULK5 521 aa12.65□□□□□ -0.38
TGFB1-204ENST00000600196 GOLGA6L7A0A1B0GV03 622 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 CTAGE9A4FU28 777 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 USP27XA6NNY8 438 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 TJP3O95049 919 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 FTCDO95954 541 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 TCF4P15884 667 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 MX2P20592 715 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 HOXD9P28356 352 aaPredicted RBP12.64□□□□□ -0.39
TGFB1-204ENST00000600196 GJA4P35212 333 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 SULT2A1Q06520 285 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
TGFB1-204ENST00000600196 CA9Q16790 459 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 PARP15Q460N3 678 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 FBXO43Q4G163 708 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 ANKRD20A8PQ5CZ79 823 aa12.64□□□□□ -0.39
TGFB1-204ENST00000600196 PPP6R3Q5H9R7 873 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms