RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 DGKGP49619 791 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 GSDMDP57764 484 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 KDSRQ06136 332 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 GRSF1Q12849 480 aaKnown RBP eCLIP14.19□□□□□ -0.14
VRK3-219ENST00000600137 PIGHQ14442 188 aaPredicted RBP14.19□□□□□ -0.14
VRK3-219ENST00000600137 GSE1Q14687 1217 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 CA9Q16790 459 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 GEN1Q17RS7 908 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 ALFQ53S48 1182 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 DGKKQ5KSL6 1271 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 SCYL2Q6P3W7 929 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 MAMSTRQ6ZN01 415 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 Q6ZS52 159 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 SLFN11Q7Z7L1 901 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 CIR1Q86X95 450 aaPredicted RBP14.19□□□□□ -0.14
VRK3-219ENST00000600137 LRRC8AQ8IWT6 810 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 SUGP1Q8IWZ8 645 aaKnown RBP14.19□□□□□ -0.14
VRK3-219ENST00000600137 TERB1Q8NA31 727 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 ACRBPQ8NEB7 543 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 ATRIPQ8WXE1 791 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 ALG14Q96F25 216 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 LACRTQ9GZZ8 138 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 CHRDQ9H2X0 955 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 STIM2Q9P246 746 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 CTTNBP2NLQ9P2B4 639 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 OR12D3Q9UGF7 316 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 IP6K2Q9UHH9 426 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 STARD13Q9Y3M8 1113 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 CHD5Q8TDI0 1954 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 E9PAM4 449 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 F5H5T6 163 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 MYO1FO00160 1098 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 PJA2O43164 708 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 PROSCO94903 275 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 HOXC13P31276 330 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 CD70P32970 193 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 TNFRSF4P43489 277 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 HADHBP55084 474 aaKnown RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 CCZ1BP86790 482 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 CCZ1P86791 482 aaPredicted RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 SLC25A11Q02978 314 aaKnown RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 ACBD5Q5T8D3 534 aaPredicted RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 GRAMD4Q6IC98 578 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 CXorf57Q6NSI4 855 aaKnown RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 ADIPOR2Q86V24 386 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 CCAR2Q8N163 923 aaKnown RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 SYNPOQ8N3V7 929 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 RFFLQ8WZ73 363 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 GPATCH2LQ9NWQ4 482 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 MPP6Q9NZW5 540 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 PPARGC1AQ9UBK2 798 aaKnown RBP14.18□□□□□ -0.14
VRK3-219ENST00000600137 PCSK1NQ9UHG2 260 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 USP18Q9UMW8 372 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 OR51B4Q9Y5P0 310 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 DUSP10Q9Y6W6 482 aa14.18□□□□□ -0.14
VRK3-219ENST00000600137 CHURC1-FNTBB4DL54 471 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 NCAM2O15394 837 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 RNF40O75150 1001 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 RNF8O76064 485 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 LRIG2O94898 1065 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 LUC7L3O95232 432 aaKnown RBP14.17□□□□□ -0.14
VRK3-219ENST00000600137 APODP05090 189 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 L1CAMP32004 1257 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 AIF1P55008 147 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 LMAN2Q12907 356 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 ARL13BQ3SXY8 428 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 ERMARDQ5T6L9 678 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 CHST9Q7L1S5 443 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 NLRP14Q86W24 1093 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 RHOT2Q8IXI1 618 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 MAML2Q8IZL2 1156 aaPredicted RBP14.17□□□□□ -0.14
VRK3-219ENST00000600137 USP33Q8TEY7 942 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 RPRD1AQ96P16 312 aaPredicted RBP14.17□□□□□ -0.14
VRK3-219ENST00000600137 SNRNP25Q9BV90 132 aaKnown RBP14.17□□□□□ -0.14
VRK3-219ENST00000600137 NDFIP2Q9NV92 336 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 POLR3BQ9NW08 1133 aaPredicted RBP14.17□□□□□ -0.14
VRK3-219ENST00000600137 TBC1D30Q9Y2I9 924 aa14.17□□□□□ -0.14
VRK3-219ENST00000600137 A0A0A6YYK5 440 aaPredicted RBP14.16□□□□□ -0.14
VRK3-219ENST00000600137 A0A1B0GVM2 712 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 TBC1D3BA6NDS4 549 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 TCAF2A6NFQ2 919 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 SRGAP2O75044 1071 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 RARAP10276 462 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 ARSEP51690 589 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 PLK1P53350 603 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 CDH4P55283 916 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 TAS2R40P59535 323 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 MTAPQ13126 283 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 LRRC32Q14392 662 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 SPA17Q15506 151 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 FBXO43Q4G163 708 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 ATP13A4Q4VNC1 1196 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 RABGAP1LQ5R372 815 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 CARNMT1Q8N4J0 409 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 DTWD2Q8NBA8 298 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 KCTD15Q96SI1 283 aaPredicted RBP14.16□□□□□ -0.14
VRK3-219ENST00000600137 ACOX2Q99424 681 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 NCAPGQ9BPX3 1015 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 DESI2Q9BSY9 194 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms