RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MYOFQ9NZM1 2061 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 TMEM110-MUSTN1A8MSY1 372 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 BUB1O43683 1085 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 BUB1BO60566 1050 aaPredicted RBP19.49■□□□□ 0.71
CCDC9-205ENST00000600117 NFATC1O95644 943 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 IL1R2P27930 398 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 SCAPQ12770 1279 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 RUNX3Q13761 415 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 DHCR24Q15392 516 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 GAB4Q2WGN9 574 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 LY6G5CQ5SRR4 150 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 TMEM25Q86YD3 366 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 HAPLN3Q96S86 360 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 MAGEB5Q9BZ81 275 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 ECT2Q9H8V3 914 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 LTB4R2Q9NPC1 389 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 SPHK2Q9NRA0 654 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 GTSE1Q9NYZ3 720 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 FZD10Q9ULW2 581 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 PPP2R2CQ9Y2T4 447 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 SNX10Q9Y5X0 201 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 HS3ST4Q9Y661 456 aa19.49■□□□□ 0.71
CCDC9-205ENST00000600117 ANKRD11Q6UB99 2663 aaPredicted RBP19.49■□□□□ 0.71
CCDC9-205ENST00000600117 TRDMT1O14717 391 aaKnown RBP19.48■□□□□ 0.71
CCDC9-205ENST00000600117 TACR2P21452 398 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 CHKAP35790 457 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 GGCXP38435 758 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 MLLT6P55198 1093 aaPredicted RBP19.48■□□□□ 0.71
CCDC9-205ENST00000600117 PFKPQ01813 784 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 SLC25A11Q02978 314 aaKnown RBP19.48■□□□□ 0.71
CCDC9-205ENST00000600117 ARL13BQ3SXY8 428 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 RAP1GAP2Q684P5 730 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 RFWD3Q6PCD5 774 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 SLFN11Q7Z7L1 901 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 C14orf80Q86SX3 495 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 CHSY1Q86X52 802 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 ZNF683Q8IZ20 524 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 CLDN23Q96B33 292 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 PRICKLE1Q96MT3 831 aaPredicted RBP19.48■□□□□ 0.71
CCDC9-205ENST00000600117 DDX50Q9BQ39 737 aaKnown RBP19.48■□□□□ 0.71
CCDC9-205ENST00000600117 MARK1Q9P0L2 795 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 PCSK1NQ9UHG2 260 aa19.48■□□□□ 0.71
CCDC9-205ENST00000600117 ZZEF1O43149 2961 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 SGSHP51688 502 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 AIF1P55008 147 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 TAS2R40P59535 323 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 ITPRIPL2Q3MIP1 535 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 TXNRD3NBQ6F5E7 133 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 C11orf63Q6NUN7 778 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 TPGS1Q6ZTW0 290 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 CPA6Q8N4T0 437 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 TTC8Q8TAM2 541 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 CHFRQ96EP1 664 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 CALR3Q96L12 384 aaKnown RBP19.47■□□□□ 0.71
CCDC9-205ENST00000600117 C1orf74Q96LT6 269 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 NELL2Q99435 816 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 SNRNP25Q9BV90 132 aaKnown RBP19.47■□□□□ 0.71
CCDC9-205ENST00000600117 FAM126AQ9BYI3 521 aaPredicted RBP19.47■□□□□ 0.71
CCDC9-205ENST00000600117 IRX2Q9BZI1 471 aaPredicted RBP19.47■□□□□ 0.71
CCDC9-205ENST00000600117 TSGA10Q9BZW7 698 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 SIK2Q9H0K1 926 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 OSBPL2Q9H1P3 480 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 GOLPH3Q9H4A6 298 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 PARD6AQ9NPB6 346 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 GPATCH2LQ9NWQ4 482 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 PYCARDQ9ULZ3 195 aa19.47■□□□□ 0.71
CCDC9-205ENST00000600117 MACROD2A1Z1Q3 448 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 HOXC11O43248 304 aaPredicted RBP19.46■□□□□ 0.71
CCDC9-205ENST00000600117 PRPSAP2O60256 369 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 TSPAN3O60637 253 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 ADH1CP00326 375 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 PENKP01210 267 aaPredicted RBP19.46■□□□□ 0.71
CCDC9-205ENST00000600117 NRG1Q02297 640 aaPredicted RBP19.46■□□□□ 0.71
CCDC9-205ENST00000600117 AUHQ13825 339 aaKnown RBP19.46■□□□□ 0.71
CCDC9-205ENST00000600117 CA9Q16790 459 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 MANEALQ5VSG8 457 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 FYB2Q5VWT5 728 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 RNF43Q68DV7 783 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 FBXL22Q6P050 247 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 LGI2Q8N0V4 545 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 CSGALNACT1Q8TDX6 532 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 PRMT8Q9NR22 394 aaPredicted RBP19.46■□□□□ 0.71
CCDC9-205ENST00000600117 GMEB2Q9UKD1 530 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 HYOU1Q9Y4L1 999 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 ALG6Q9Y672 507 aa19.46■□□□□ 0.71
CCDC9-205ENST00000600117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.46■□□□□ 0.71
CCDC9-205ENST00000600117 GRID2IPA4D2P6 1211 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 SHISA7A6NL88 538 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 F5H5T6 163 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 FAM72CH0Y354 149 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 NCAM2O15394 837 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 KRT86O43790 486 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 MOCS3O95396 460 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 ADH5P11766 374 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 CD72P21854 359 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 COMTP21964 271 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 GJA4P35212 333 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 SLC1A1P43005 524 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 RPS9P46781 194 aaKnown RBP19.45■□□□□ 0.7
CCDC9-205ENST00000600117 SOX9P48436 509 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms