RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 LMAN2Q12907 356 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 ZNF234Q14588 700 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 STARD3Q14849 445 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 TTC39BQ5VTQ0 682 aaPredicted RBP29.12■■■□□ 2.25
SSBP4-206ENST00000599699 MBLAC2Q68D91 279 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 ADIPOR2Q86V24 386 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 FAM131BQ86XD5 332 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 MCOLN2Q8IZK6 566 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 CYB5D2Q8WUJ1 264 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 INVSQ9Y283 1065 aa29.12■■■□□ 2.25
SSBP4-206ENST00000599699 LUC7L2Q9Y383 392 aaKnown RBP29.12■■■□□ 2.25
SSBP4-206ENST00000599699 A0A1W2PQF6 199 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 C2CD4BA6NLJ0 364 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 ATP5BP06576 529 aaKnown RBP29.11■■■□□ 2.25
SSBP4-206ENST00000599699 IL12RB1P42701 662 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 ZBED6P86452 979 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 C15orf59Q2T9L4 293 aaPredicted RBP29.11■■■□□ 2.25
SSBP4-206ENST00000599699 CCDC14Q49A88 953 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 FNDC3BQ53EP0 1204 aaKnown RBP29.11■■■□□ 2.25
SSBP4-206ENST00000599699 TDRD12Q587J7 1177 aaKnown RBP29.11■■■□□ 2.25
SSBP4-206ENST00000599699 SERPINA13PQ6UXR4 307 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.11■■■□□ 2.25
SSBP4-206ENST00000599699 KIAA0907Q7Z7F0 614 aaPredicted RBP29.11■■■□□ 2.25
SSBP4-206ENST00000599699 RUBCNQ92622 972 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 CAPN11Q9UMQ6 739 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.11■■■□□ 2.25
SSBP4-206ENST00000599699 USP34Q70CQ2 3546 aa29.11■■■□□ 2.25
SSBP4-206ENST00000599699 SIGLEC16A6NMB1 481 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 SYNCRIPO60506 623 aaKnown RBP29.1■■■□□ 2.25
SSBP4-206ENST00000599699 RFC1P35251 1148 aaPredicted RBP29.1■■■□□ 2.25
SSBP4-206ENST00000599699 FUT11Q495W5 492 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 FSCBQ5H9T9 825 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 KIAA1211LQ6NV74 962 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 C14orf80Q86SX3 495 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 CCAR2Q8N163 923 aaKnown RBP29.1■■■□□ 2.25
SSBP4-206ENST00000599699 IGSF8Q969P0 613 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 ANLNQ9NQW6 1124 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 KIAA1522Q9P206 1035 aaPredicted RBP29.1■■■□□ 2.25
SSBP4-206ENST00000599699 GMEB2Q9UKD1 530 aa29.1■■■□□ 2.25
SSBP4-206ENST00000599699 RIF1Q5UIP0 2472 aaKnown RBP29.1■■■□□ 2.25
SSBP4-206ENST00000599699 A0A1B0GVM2 712 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 TCAF2A6NFQ2 919 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 MOCS3O95396 460 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 GPD1P21695 349 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 RRM1P23921 792 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 PTPN9P43378 593 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 LAIR1Q6GTX8 287 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 OLIG1Q8TAK6 271 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 SYN2Q92777 582 aaPredicted RBP29.09■■■□□ 2.25
SSBP4-206ENST00000599699 MCEEQ96PE7 176 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 TMPRSS4Q9NRS4 437 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 SNX10Q9Y5X0 201 aa29.09■■■□□ 2.25
SSBP4-206ENST00000599699 BZW2Q9Y6E2 419 aaKnown RBP29.09■■■□□ 2.25
SSBP4-206ENST00000599699 WDR87Q6ZQQ6 2873 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 GPR179Q6PRD1 2367 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 DDX3XO00571 662 aaKnown RBP eCLIP29.08■■■□□ 2.25
SSBP4-206ENST00000599699 DCLK1O15075 740 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 GYPCP04921 128 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 EPHX1P07099 455 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 DLDP09622 509 aaKnown RBP29.08■■■□□ 2.25
SSBP4-206ENST00000599699 GABRG2P18507 467 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 SH3PXD2AQ5TCZ1 1133 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 DCUN1D2Q6PH85 259 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 WDR59Q6PJI9 974 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 LRRC31Q6UY01 552 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 BNIPLQ7Z465 357 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 KBTBD6Q86V97 674 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 VCPIP1Q96JH7 1222 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 LMLNQ96KR4 655 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.08■■■□□ 2.25
SSBP4-206ENST00000599699 ITIH6Q6UXX5 1313 aa29.08■■■□□ 2.25
SSBP4-206ENST00000599699 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP29.07■■■□□ 2.24
SSBP4-206ENST00000599699 ENDOD1O94919 500 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 PRKCHP24723 683 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 CSKP41240 450 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 ZNF177Q13360 481 aaPredicted RBP29.07■■■□□ 2.24
SSBP4-206ENST00000599699 ARL13BQ3SXY8 428 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 RAB6CQ53S08 254 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 PITRM1Q5JRX3 1037 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 ACBD5Q5T8D3 534 aaPredicted RBP29.07■■■□□ 2.24
SSBP4-206ENST00000599699 STRADAQ7RTN6 431 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 VPS36Q86VN1 386 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 FAM160A2Q8N612 972 aaPredicted RBP29.07■■■□□ 2.24
SSBP4-206ENST00000599699 FAM172AQ8WUF8 416 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 SPACA7Q96KW9 195 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 RAB6CQ9H0N0 254 aa29.07■■■□□ 2.24
SSBP4-206ENST00000599699 I6L893 689 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-206ENST00000599699 FTLP02792 175 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-206ENST00000599699 SERPING1P05155 500 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 GZMAP12544 262 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 CASP14P31944 242 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 IRAK1P51617 712 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 ENPP2Q13822 863 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 DNAAF5Q86Y56 855 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 DCLK2Q8N568 766 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 RLN3Q8WXF3 142 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 C1orf74Q96LT6 269 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 HAPLN3Q96S86 360 aa29.06■■■□□ 2.24
SSBP4-206ENST00000599699 INTS6Q9UL03 887 aaKnown RBP29.06■■■□□ 2.24
SSBP4-206ENST00000599699 TCRBV5S1A1TA0A578 114 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms