RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 RPS24P62847 133 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 CCZ1BP86790 482 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 CCZ1P86791 482 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 CDH18Q13634 790 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 CCINQ13939 588 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 DMC1Q14565 340 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 PON2Q15165 354 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 HSF5Q4G112 596 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 MANEALQ5VSG8 457 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 C11orf63Q6NUN7 778 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 MAMSTRQ6ZN01 415 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 SETD3Q86TU7 594 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 FBXL6Q8N531 539 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 TERB1Q8NA31 727 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 ACRBPQ8NEB7 543 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 AP4E1Q9UPM8 1137 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 STARD13Q9Y3M8 1113 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 F5P12259 2224 aa17.08■□□□□ 0.32
SHKBP1-219ENST00000599575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 DLL1O00548 723 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 FGF10O15520 208 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 KRT86O43790 486 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 RHOQP17081 205 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 HOXC13P31276 330 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 SLC25A11Q02978 314 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 SEMA3BQ13214 749 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 ZNF177Q13360 481 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 MESDQ14696 234 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 UBXN2BQ14CS0 331 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 DPYSL2Q16555 572 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 RAB6CQ53S08 254 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 ZNF783Q6ZMS7 281 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 ANKS1BQ7Z6G8 1248 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 KIAA0907Q7Z7F0 614 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 NAT16Q8N8M0 369 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 FLCNQ8NFG4 579 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 TBC1D31Q96DN5 1066 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 RAB6CQ9H0N0 254 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 PLK2Q9NYY3 685 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 KIAA1522Q9P206 1035 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 STIM2Q9P246 746 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 RCOR3Q9P2K3 495 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 PCSK1NQ9UHG2 260 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 TBC1D30Q9Y2I9 924 aa17.07■□□□□ 0.32
SHKBP1-219ENST00000599575 TICRRQ7Z2Z1 1910 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 CXorf51AA0A1B0GTR3 108 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 H0Y626 953 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 ATG13O75143 517 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 LRIG2O94898 1065 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 MOCS3O95396 460 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 CHRNB1P11230 501 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 ETFBP38117 255 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 SLC6A11P48066 632 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 MAPKAPK2P49137 400 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 MRPS21P82921 87 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 TMEM31Q5JXX7 168 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 C6orf118Q5T5N4 469 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 FSTL4Q6MZW2 842 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 TRMT11Q7Z4G4 463 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 C12orf40Q86WS4 652 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 VSIG1Q86XK7 387 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 MAP7D3Q8IWC1 876 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 AHI1Q8N157 1196 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 UCMAQ8WVF2 138 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 BHMTQ93088 406 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 IGSF8Q969P0 613 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 BTBD6Q96KE9 485 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 SNRNP25Q9BV90 132 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 LACRTQ9GZZ8 138 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 CATSPERBQ9H7T0 1116 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 ZWILCHQ9H900 591 aa17.06■□□□□ 0.32
SHKBP1-219ENST00000599575 RCCD1A6NED2 376 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 SRGAP2O75044 1071 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 CD72P21854 359 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 SGSHP51688 502 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 PLK1P53350 603 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 PDK2Q15119 407 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 CWF19L1Q69YN2 538 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 CYP4V2Q6ZWL3 525 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 C14orf80Q86SX3 495 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 RHOT1Q8IXI2 618 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 CCDC105Q8IYK2 499 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 SYCE1Q8N0S2 351 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 CFAP52Q8N1V2 620 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 CARNMT1Q8N4J0 409 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 TPCN2Q8NHX9 752 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 FAM71BQ8TC56 605 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 P2RY11Q96G91 374 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 PEBP4Q96S96 227 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 FOXQ1Q9C009 403 aa17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 DHX35Q9H5Z1 703 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-219ENST00000599575 LMAN1LQ9HAT1 526 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms