RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	SNX5	Q9Y5X3	404 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CUL9	Q8IWT3	2517 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LOXHD1	Q8IVV2	1947 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335		A8MX80	341 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FSCN2	O14926	492 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DNAJC6	O75061	913 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	B3GAT3	O94766	335 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KRT16	P08779	473 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ZCCHC18	P0CG32	403 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	STAG3L1	P0CL83	205 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TCF4	P15884	667 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KYNU	Q16719	465 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	EMC1	Q8N766	993 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ANKRD42	Q8N9B4	389 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SNF8	Q96H20	258 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C1orf74	Q96LT6	269 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C9orf72	Q96LT7	481 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HERPUD2	Q9BSE4	406 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ADNP	Q9H2P0	1102 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	EDAR	Q9UNE0	448 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	AGAP1	Q9UPQ3	857 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SLC8A2	Q9UPR5	921 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GIT1	Q9Y2X7	761 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TRPV2	Q9Y5S1	764 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GRXCR2	A6NFK2	248 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SGK1	O00141	431 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GPR182	O15218	404 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GAS2	O43903	313 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	UBAP2	Q5T6F2	1119 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PLPPR4	Q7Z2D5	763 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TFAP2B	Q92481	460 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	WNT8B	Q93098	351 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CHMP6	Q96FZ7	201 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DDX50	Q9BQ39	737 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HEPH	Q9BQS7	1158 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DCLK3	Q9C098	648 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MLXIPL	Q9NP71	852 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DDX18	Q9NVP1	670 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HMGXB4	Q9UGU5	601 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CPSF3	Q9UKF6	684 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NFS1	Q9Y697	457 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KAT6A	Q92794	2004 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LACTBL1	A8MY62	500 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FBP2	O00757	339 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SNPH	O15079	494 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CBFA2T3	O75081	653 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KRT3	P12035	628 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CKB	P12277	381 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CLDN10	P78369	228 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IFI35	P80217	286 aa	Predicted RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FPGS	Q05932	587 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C1QBP	Q07021	282 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MTM1	Q13496	603 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CDO1	Q16878	200 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CTC1	Q2NKJ3	1217 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CNPY1	Q3B7I2	92 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MAP3K21	Q5TCX8	1036 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RFPL4B	Q6ZWI9	263 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	UBA3	Q8TBC4	463 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CCDC28B	Q9BUN5	200 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CXCL16	Q9H2A7	254 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	AGO3	Q9H9G7	860 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PRSS47	A8MTI9	375 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335		M0QYV0	167 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	UBTFL6	P0CB48	400 aa	Predicted RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CHRNB1	P11230	501 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MAN1A1	P33908	653 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IZUMO3	Q5VZ72	239 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	JADE1	Q6IE81	842 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DENND1B	Q6P3S1	775 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MFSD7	Q6UXD7	560 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TRPM8	Q7Z2W7	1104 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PCGF5	Q86SE9	256 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	UCMA	Q8WVF2	138 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LRRC19	Q9H756	370 aa		11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DDX56	Q9NY93	547 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MRPL39	Q9NYK5	338 aa	Known RBP	11.62	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ALAS2	P22557	587 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NAA20	P61599	178 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RIPK1	Q13546	671 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SNX17	Q15036	470 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	AGBL2	Q5U5Z8	902 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SCYL2	Q6P3W7	929 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PHF13	Q86YI8	300 aa	Predicted RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HSPH1	Q92598	858 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SMYD3	Q9H7B4	428 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM5	Q9Y2B1	443 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PSTPIP1	O43586	416 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GRAP2	O75791	330 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TJP3	O95049	919 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	INMT	O95050	263 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	BAG2	O95816	211 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ASL	P04424	464 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms