RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 PGM3O95394 542 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 IRF1P10914 325 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 ATP6V1B1P15313 513 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 PKNOX1P55347 436 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 TPI1P60174 286 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 TLK2Q86UE8 772 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 TBCBQ99426 244 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 OMDQ99983 421 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 CNTN6Q9UQ52 1028 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 LRCH1Q9Y2L9 728 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 HBS1LQ9Y450 684 aaKnown RBP11.51□□□□□ -0.57
ZNF544-213ENST00000599227 COL11A2P13942 1736 aaPredicted RBP11.51□□□□□ -0.57
ZNF544-213ENST00000599227 CCDC189A1A4V9 331 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 ENO3P13929 434 aaPredicted RBP11.51□□□□□ -0.57
ZNF544-213ENST00000599227 SMPD1P17405 629 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 BOLA3Q53S33 107 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 LDB1Q86U70 411 aaPredicted RBP11.51□□□□□ -0.57
ZNF544-213ENST00000599227 ADGRF2Q8IZF7 708 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 DNERQ8NFT8 737 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 OR52K1Q8NGK4 314 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 FAM193BQ96PV7 902 aaPredicted RBP11.51□□□□□ -0.57
ZNF544-213ENST00000599227 ULBP1Q9BZM6 244 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 DDX43Q9NXZ2 648 aaKnown RBP11.51□□□□□ -0.57
ZNF544-213ENST00000599227 TMEM216Q9P0N5 145 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 SFMBT1Q9UHJ3 866 aa11.51□□□□□ -0.57
ZNF544-213ENST00000599227 WFS1O76024 890 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 PIGRP01833 764 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 PAPOLAP51003 745 aaKnown RBP11.5□□□□□ -0.57
ZNF544-213ENST00000599227 LAMC2Q13753 1193 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 TARBP2Q15633 366 aaKnown RBP11.5□□□□□ -0.57
ZNF544-213ENST00000599227 FBXO47Q5MNV8 452 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 GCNAQ96QF7 691 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 TUBB6Q9BUF5 446 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 SLC4A7Q9Y6M7 1214 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 NUP205Q92621 2012 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 NDC80O14777 642 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 ATG7O95352 703 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 AMHP03971 560 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 BPGMP07738 259 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 CD1EP15812 388 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 ABCD1P33897 745 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 HDAC4P56524 1084 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 SOWAHAQ2M3V2 549 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 ILDR2Q71H61 639 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 TUBGCP5Q96RT8 1024 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 EBNA1BP2Q99848 306 aaKnown RBP11.5□□□□□ -0.57
ZNF544-213ENST00000599227 EBF3Q9H4W6 596 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 SYBUQ9NX95 663 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 GTSE1Q9NYZ3 720 aa11.5□□□□□ -0.57
ZNF544-213ENST00000599227 MYOCOSA0A1B0GUC4 107 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 C9JVG2 144 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 F8W810 466 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 EEF2KO00418 725 aaKnown RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 CHADO15335 359 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 GSTA2P09210 222 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 IL4RP24394 825 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 MBTD1Q05BQ5 628 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 FAM219BQ5XKK7 198 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 CDKL3Q8IVW4 592 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 TRIM42Q8IWZ5 723 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 NIPA2Q8N8Q9 360 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 SKA2Q8WVK7 121 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 MCRS1Q96EZ8 462 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 EXOC2Q96KP1 924 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 AGAP2Q99490 1192 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 TRIP11Q15643 1979 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 E7ESA3 106 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 RNF103O00237 685 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 FAM189A1O60320 539 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 YBX3P16989 372 aaKnown RBP eCLIP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 NELFEP18615 380 aaKnown RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 PDCD2Q16342 344 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 HSF5Q4G112 596 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 SPDYAQ5MJ70 313 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 UBR7Q8N806 425 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 RNF139Q8WU17 664 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 SEPT5Q99719 369 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 PDZD7Q9H5P4 517 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 GBA2Q9HCG7 927 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 NMRK2Q9NPI5 230 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 CHST12Q9NRB3 414 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 C20orf96Q9NUD7 363 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 MPP6Q9NZW5 540 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 LY75O60449 1722 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 A0A1B0GVG6 124 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 KPNA7A9QM74 516 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 B4GALT4O60513 344 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 RALBP11234 206 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 DNAJB2P25686 324 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 NUDT2P50583 147 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 COPAP53621 1224 aa11.49□□□□□ -0.57
ZNF544-213ENST00000599227 ZNF280AP59817 542 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-213ENST00000599227 SLC6A3Q01959 620 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms