RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 HOXC13P31276 330 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 SLC6A4P31645 630 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 FNTAP49354 379 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 TPI1P60174 286 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 GUCY2DQ02846 1103 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 SLC9A4Q6AI14 798 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 CCDC137Q6PK04 289 aaKnown RBP21.57■■□□□ 1.04
COPE-208ENST00000598969 HTR3DQ70Z44 454 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 MTERF4Q7Z6M4 381 aaKnown RBP21.57■■□□□ 1.04
COPE-208ENST00000598969 SMRP1Q8NCR6 262 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 ZSCAN18Q8TBC5 510 aaPredicted RBP21.57■■□□□ 1.04
COPE-208ENST00000598969 DCLK3Q9C098 648 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 PCYOX1Q9UHG3 505 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 VANGL2Q9ULK5 521 aa21.57■■□□□ 1.04
COPE-208ENST00000598969 UTP11Q9Y3A2 253 aaKnown RBP21.57■■□□□ 1.04
COPE-208ENST00000598969 LATS1O95835 1130 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 TACR2P21452 398 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 DYNLT1P63172 113 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 ACBD5Q5T8D3 534 aaPredicted RBP21.56■■□□□ 1.04
COPE-208ENST00000598969 FBXL22Q6P050 247 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 CCNI2Q6ZMN8 369 aaPredicted RBP21.56■■□□□ 1.04
COPE-208ENST00000598969 CHSY1Q86X52 802 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 PLD5Q8N7P1 536 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 MAK16Q9BXY0 300 aaKnown RBP21.56■■□□□ 1.04
COPE-208ENST00000598969 RAB17Q9H0T7 212 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 EPB41L5Q9HCM4 733 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 FEZ2Q9UHY8 353 aaPredicted RBP21.56■■□□□ 1.04
COPE-208ENST00000598969 R3HDM2Q9Y2K5 976 aaKnown RBP21.56■■□□□ 1.04
COPE-208ENST00000598969 SH3BP1Q9Y3L3 701 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 FAM187AA6NFU0 413 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 DCLK1O15075 740 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 TCF3P15923 654 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 TNFRSF8P28908 595 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 EPHB2P29323 1055 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 HTR7P34969 479 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 IRAK1P51617 712 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 USP4Q13107 963 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 TFDP2Q14188 446 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 RFWD3Q6PCD5 774 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 DDX42Q86XP3 938 aaKnown RBP eCLIP21.56■■□□□ 1.04
COPE-208ENST00000598969 CCDC105Q8IYK2 499 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 TTC16Q8NEE8 873 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 IGSF8Q969P0 613 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 TBC1D31Q96DN5 1066 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 RIPOR3Q96MK2 946 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 LSM7Q9UK45 103 aaKnown RBP21.56■■□□□ 1.04
COPE-208ENST00000598969 MFHAS1Q9Y4C4 1052 aa21.56■■□□□ 1.04
COPE-208ENST00000598969 NUP210Q8TEM1 1887 aaPredicted RBP21.55■■□□□ 1.04
COPE-208ENST00000598969 IGLV3-10A0A075B6K4 115 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 TTI1O43156 1089 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 ERCC2P18074 760 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 COILP38432 576 aaPredicted RBP21.55■■□□□ 1.04
COPE-208ENST00000598969 MTHFRP42898 656 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 CCDC85BQ15834 202 aaPredicted RBP21.55■■□□□ 1.04
COPE-208ENST00000598969 ZNF77Q15935 545 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 ADGRF1Q5T601 910 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 NCBP2-AS2Q69YL0 99 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 DEFB123Q8N688 67 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 GDF3Q9NR23 364 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 GDE1Q9NZC3 331 aa21.55■■□□□ 1.04
COPE-208ENST00000598969 PPARGC1AQ9UBK2 798 aaKnown RBP21.55■■□□□ 1.04
COPE-208ENST00000598969 BRWD1Q9NSI6 2320 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 E2F8A0AVK6 867 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 DRGXA6NNA5 263 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 GFRA2O00451 464 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 APOL1O14791 398 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 DAPK3O43293 454 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 CCNG2Q16589 344 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 C5orf22Q49AR2 442 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 FAM78AQ5JUQ0 283 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 RWDD4Q6NW29 188 aaKnown RBP21.54■■□□□ 1.04
COPE-208ENST00000598969 BBS7Q8IWZ6 715 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 FAM217AQ8IXS0 508 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 LGI2Q8N0V4 545 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.54■■□□□ 1.04
COPE-208ENST00000598969 C1orf54Q8WWF1 131 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 RSPRY1Q96DX4 576 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 ASB16Q96NS5 453 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 HINFPQ9BQA5 517 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 POMKQ9H5K3 350 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 MPP6Q9NZW5 540 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 SAE1Q9UBE0 346 aaPredicted RBP21.54■■□□□ 1.04
COPE-208ENST00000598969 CDH7Q9ULB5 785 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 DENND4AQ7Z401 1863 aa21.54■■□□□ 1.04
COPE-208ENST00000598969 NPNTQ6UXI9 565 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 LRRC31Q6UY01 552 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 GRK7Q8WTQ7 553 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 SUSD6Q92537 303 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 HAUS1Q96CS2 278 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 PRICKLE1Q96MT3 831 aaPredicted RBP21.53■■□□□ 1.04
COPE-208ENST00000598969 LRRC3BQ96PB8 259 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 MYADMQ96S97 322 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 CD207Q9UJ71 328 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 ZNF510Q9Y2H8 683 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.53■■□□□ 1.04
COPE-208ENST00000598969 F5H5T6 163 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 H3BQ06 376 aaPredicted RBP21.53■■□□□ 1.04
COPE-208ENST00000598969 TRDMT1O14717 391 aaKnown RBP21.53■■□□□ 1.04
COPE-208ENST00000598969 FOSL2P15408 326 aa21.53■■□□□ 1.04
COPE-208ENST00000598969 PECAM1P16284 738 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms