RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TAS2R14Q9NYV8 317 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 STON1Q9Y6Q2 735 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 ITIH6Q6UXX5 1313 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 TCRBV21S2A2A0A5A6 115 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 H0Y626 953 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
SSBP4-204ENST00000597724 IL12RB1P42701 662 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 PTPN9P43378 593 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 ZBED6P86452 979 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 LMAN2Q12907 356 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 CDH18Q13634 790 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 USP39Q53GS9 565 aaKnown RBP17.28■□□□□ 0.36
SSBP4-204ENST00000597724 TTC39BQ5VTQ0 682 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-204ENST00000597724 HGSNATQ68CP4 663 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 MBLAC2Q68D91 279 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 WDR59Q6PJI9 974 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 PRR23BQ6ZRT6 265 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 CEP68Q76N32 757 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 C14orf80Q86SX3 495 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 FAM131BQ86XD5 332 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 CCDC117Q8IWD4 279 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-204ENST00000597724 CCAR2Q8N163 923 aaKnown RBP17.28■□□□□ 0.36
SSBP4-204ENST00000597724 CPLX3Q8WVH0 158 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 HMGB4Q8WW32 186 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 RUBCNQ92622 972 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 IGSF8Q969P0 613 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 C1orf74Q96LT6 269 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 SELENOOQ9BVL4 669 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 INTS6Q9UL03 887 aaKnown RBP17.28■□□□□ 0.36
SSBP4-204ENST00000597724 RAB23Q9ULC3 237 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
SSBP4-204ENST00000597724 LUC7L2Q9Y383 392 aaKnown RBP17.28■□□□□ 0.36
SSBP4-204ENST00000597724 A0A1B0GVM2 712 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 TCAF2A6NFQ2 919 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 TMCO5BA8MYB1 307 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 DDX3XO00571 662 aaKnown RBP eCLIP17.27■□□□□ 0.361e-29■■■■□ 21.4
SSBP4-204ENST00000597724 CBFA2T2O43439 604 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 GYPCP04921 128 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 GZMAP12544 262 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 GABRG2P18507 467 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 POLR2EP19388 210 aaKnown RBP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 RRM1P23921 792 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 SDC4P31431 198 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 LPAL2Q16609 132 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 C15orf59Q2T9L4 293 aaPredicted RBP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 FUT11Q495W5 492 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 C5orf22Q49AR2 442 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 RAB6CQ53S08 254 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 PPP1R15BQ5SWA1 713 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 ACBD5Q5T8D3 534 aaPredicted RBP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 SH3PXD2AQ5TCZ1 1133 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 LAIR1Q6GTX8 287 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 KIAA1211LQ6NV74 962 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 DNAJC24Q6P3W2 148 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 STRADAQ7RTN6 431 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 CENPIQ92674 756 aaPredicted RBP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 TTC17Q96AE7 1141 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 RPRD1AQ96P16 312 aaPredicted RBP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 RAB6CQ9H0N0 254 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 TMPRSS4Q9NRS4 437 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 KIAA1522Q9P206 1035 aaPredicted RBP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 BCCIPQ9P287 314 aaKnown RBP eCLIP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 PLA2G4CQ9UP65 541 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 RAD54BQ9Y620 910 aa17.27■□□□□ 0.36
SSBP4-204ENST00000597724 BZW2Q9Y6E2 419 aaKnown RBP17.27■□□□□ 0.36
SSBP4-204ENST00000597724 ATP5BP06576 529 aaKnown RBP17.26■□□□□ 0.35
SSBP4-204ENST00000597724 DLDP09622 509 aaKnown RBP17.26■□□□□ 0.35
SSBP4-204ENST00000597724 GGCXP38435 758 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 IRAK1P51617 712 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 RPL7AP62424 266 aaKnown RBP17.26■□□□□ 0.35
SSBP4-204ENST00000597724 PTPRNQ16849 979 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 CDO1Q16878 200 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 KBTBD6Q86V97 674 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 CIR1Q86X95 450 aaPredicted RBP17.26■□□□□ 0.35
SSBP4-204ENST00000597724 PGBD3Q8N328 593 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 CYB5D2Q8WUJ1 264 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 ZC3H10Q96K80 434 aaKnown RBP17.26■□□□□ 0.35
SSBP4-204ENST00000597724 HAPLN3Q96S86 360 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 TMEM245Q9H330 911 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 INVSQ9Y283 1065 aa17.26■□□□□ 0.35
SSBP4-204ENST00000597724 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.26■□□□□ 0.35
SSBP4-204ENST00000597724 SPAG17Q6Q759 2223 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 ANKRD62A6NC57 917 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 DRGXA6NNA5 263 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 DCLK1O15075 740 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 RTN2O75298 545 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 FTLP02792 175 aaPredicted RBP17.25■□□□□ 0.35
SSBP4-204ENST00000597724 SERPING1P05155 500 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 GPD1P21695 349 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 PRKCHP24723 683 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 CASP14P31944 242 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 P2RY2P41231 377 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 CSKP41240 450 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 SLC12A1Q13621 1099 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 STARD3Q14849 445 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 PITRM1Q5JRX3 1037 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 ARTNQ5T4W7 220 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 SERPINA13PQ6UXR4 307 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 ZNF683Q8IZ20 524 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms