RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ENDOD1O94919 500 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 CAVIN2O95810 425 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 ASLP04424 464 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 POLR2EP19388 210 aaKnown RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 TFE3P19532 575 aaPredicted RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 FLT3P36888 993 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 PLK1P53350 603 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 LIMK1P53667 647 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 GSCP56915 257 aaPredicted RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 PTP4A2Q12974 167 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 NME3Q13232 169 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 SLC12A1Q13621 1099 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 AUHQ13825 339 aaKnown RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 ARID5BQ14865 1188 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 ACBD5Q5T8D3 534 aaPredicted RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 FAM102AQ5T9C2 384 aaPredicted RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 PEAR1Q5VY43 1037 aaPredicted RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 TRNP1Q6NT89 227 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 FBXL22Q6P050 247 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 SERPINA13PQ6UXR4 307 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 LPCAT2Q7L5N7 544 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 NETO1Q8TDF5 533 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 MYO19Q96H55 970 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 PCMTD1Q96MG8 357 aaPredicted RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 PCDHB18PQ96TA0 734 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 PRDM16Q9HAZ2 1276 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 ITM2CQ9NQX7 267 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 KIAA1522Q9P206 1035 aaPredicted RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 USP36Q9P275 1121 aaKnown RBP13.49□□□□□ -0.25
USE1-207ENST00000596136 MYO6Q9UM54 1294 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 HS3ST4Q9Y661 456 aa13.49□□□□□ -0.25
USE1-207ENST00000596136 SYNJ2BP-COX16A0A087WUM0 186 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 A0A1B0GTH6 734 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 A0A1B0GVM2 712 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 A0A1W2PQC6 194 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 TCAF2A6NFQ2 919 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 I6L893 689 aaPredicted RBP13.48□□□□□ -0.25
USE1-207ENST00000596136 MAP3K13O43283 966 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 AP5Z1O43299 807 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 SYNCRIPO60506 623 aaKnown RBP13.48□□□□□ -0.25
USE1-207ENST00000596136 PAGE1O75459 146 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 ADCY5O95622 1261 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 EPHX1P07099 455 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 PTMSP20962 102 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 CSKP41240 450 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
USE1-207ENST00000596136 CREB5Q02930 508 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 CENPCQ03188 943 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 ARID5AQ03989 594 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 CDH18Q13634 790 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 SF3A2Q15428 464 aaKnown RBP13.48□□□□□ -0.25
USE1-207ENST00000596136 C2CD6Q53TS8 623 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 RABGAP1LQ5R372 815 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 ARTNQ5T4W7 220 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 PHF13Q86YI8 300 aaPredicted RBP13.48□□□□□ -0.25
USE1-207ENST00000596136 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 CCDC117Q8IWD4 279 aaPredicted RBP13.48□□□□□ -0.25
USE1-207ENST00000596136 TMEFF1Q8IYR6 380 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 ZNF683Q8IZ20 524 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 CARNMT1Q8N4J0 409 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 OR2T3Q8NH03 318 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 CYB5D2Q8WUJ1 264 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 BAP1Q92560 729 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 RNF34Q969K3 372 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 MRGPRX3Q96LB0 322 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 C1orf74Q96LT6 269 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 TBCBQ99426 244 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 SLC6A17Q9H1V8 727 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 WDCPQ9H6R7 721 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 FBRSQ9HAH7 460 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 ANLNQ9NQW6 1124 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 COX16Q9P0S2 106 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
USE1-207ENST00000596136 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 SYCE3A1L190 88 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 H0Y626 953 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 SLC30A4O14863 429 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 GDF9O60383 454 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 SRPRAP08240 638 aaKnown RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 HLA-EP13747 358 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 HOXD12P35452 270 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 DPP6P42658 865 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 PTGER3P43115 390 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 DHPSP49366 369 aaPredicted RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 SULT1E1P49888 294 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 ATXN1P54253 815 aaKnown RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 OXCT1P55809 520 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 NR1I3Q14994 352 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 CCDC6Q16204 474 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 CLEC16AQ2KHT3 1053 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 PLEKHG6Q3KR16 790 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 FILIP1LQ4L180 1135 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 FNDC3BQ53EP0 1204 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms