RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 AIF1P55008 147 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 MRPS21P82921 87 aaKnown RBP14.81□□□□□ -0.04
LIG1-208ENST00000595758 NRG1Q02297 640 aaPredicted RBP14.81□□□□□ -0.04
LIG1-208ENST00000595758 SCAPQ12770 1279 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 ACAP1Q15027 740 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 GEN1Q17RS7 908 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 EFHC2Q5JST6 749 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 EMC10Q5UCC4 262 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 MAMSTRQ6ZN01 415 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 C1orf210Q8IVY1 113 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 ZNF683Q8IZ20 524 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 CCAR2Q8N163 923 aaKnown RBP14.81□□□□□ -0.04
LIG1-208ENST00000595758 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.81□□□□□ -0.04
LIG1-208ENST00000595758 RPLP0P6Q8NHW5 317 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 WFDC5Q8TCV5 224 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 KCNV2Q8TDN2 545 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 USP33Q8TEY7 942 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 BTBD6Q96KE9 485 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 EIF3CQ99613 913 aaKnown RBP14.81□□□□□ -0.04
LIG1-208ENST00000595758 LUC7LQ9NQ29 371 aaKnown RBP14.81□□□□□ -0.04
LIG1-208ENST00000595758 ABCB8Q9NUT2 735 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 PCSK1NQ9UHG2 260 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 GGA2Q9UJY4 613 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 STARD13Q9Y3M8 1113 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 PCDHA13Q9Y5I0 950 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.8□□□□□ -0.04
LIG1-208ENST00000595758 LAMTOR5O43504 91 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
LIG1-208ENST00000595758 TIMM44O43615 452 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 PRPSAP2O60256 369 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 LRCH4O75427 683 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 CLDN11O75508 207 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 NDUFA10O95299 355 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 IPO7O95373 1038 aaKnown RBP14.8□□□□□ -0.04
LIG1-208ENST00000595758 PABPC1P11940 636 aaKnown RBP14.8□□□□□ -0.04
LIG1-208ENST00000595758 MIPP30301 263 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 CD70P32970 193 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 PCK1P35558 622 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 TIE1P35590 1138 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 KIR2DL1P43626 348 aaPredicted RBP14.8□□□□□ -0.04
LIG1-208ENST00000595758 IRAK1P51617 712 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 CDH4P55283 916 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 ZNF177Q13360 481 aaPredicted RBP14.8□□□□□ -0.04
LIG1-208ENST00000595758 FSCBQ5H9T9 825 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 PKN3Q6P5Z2 889 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 RAD9BQ6WBX8 426 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 CHST9Q7L1S5 443 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 NIPA2Q8N8Q9 360 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 SLC35G2Q8TBE7 412 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 WFIKKN2Q8TEU8 576 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 UCMAQ8WVF2 138 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 LMLNQ96KR4 655 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 PRRX2Q99811 253 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 MAGEB5Q9BZ81 275 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 CIPCQ9C0C6 399 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 ELOVL2Q9NXB9 296 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 KIAA1522Q9P206 1035 aaPredicted RBP14.8□□□□□ -0.04
LIG1-208ENST00000595758 LCMT1Q9UIC8 334 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 FZD10Q9ULW2 581 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 ATG2BQ96BY7 2078 aa14.8□□□□□ -0.04
LIG1-208ENST00000595758 IGLV3-10A0A075B6K4 115 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 FAM72CH0Y354 149 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 CNTN5O94779 1100 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
LIG1-208ENST00000595758 L1CAMP32004 1257 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 CXCL12P48061 93 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 CCR3P51677 355 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 OXCT1P55809 520 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 LMAN2Q12907 356 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 EIF4HQ15056 248 aaKnown RBP14.79□□□□□ -0.04
LIG1-208ENST00000595758 HSF5Q4G112 596 aaPredicted RBP14.79□□□□□ -0.04
LIG1-208ENST00000595758 ALFQ53S48 1182 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 ARTNQ5T4W7 220 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 ERMARDQ5T6L9 678 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 FAM72AQ5TYM5 149 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 FAM72DQ6L9T8 149 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
LIG1-208ENST00000595758 KIAA1549LQ6ZVL6 1849 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 KIAA0907Q7Z7F0 614 aaPredicted RBP14.79□□□□□ -0.04
LIG1-208ENST00000595758 ADIPOR2Q86V24 386 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 FAM72BQ86X60 149 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 TMEM139Q8IV31 216 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 RHOT2Q8IXI1 618 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 KMT2EQ8IZD2 1858 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 AHI1Q8N157 1196 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 PYROXD2Q8N2H3 581 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 CCDC33Q8N5R6 958 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 ALLCQ8N6M5 410 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 ZNF513Q8N8E2 541 aaPredicted RBP14.79□□□□□ -0.04
LIG1-208ENST00000595758 RFFLQ8WZ73 363 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 ACDQ96AP0 544 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 PEBP4Q96S96 227 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 ZYG11BQ9C0D3 744 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 OSGEPQ9NPF4 335 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 MPP6Q9NZW5 540 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 PPARGC1AQ9UBK2 798 aaKnown RBP14.79□□□□□ -0.04
LIG1-208ENST00000595758 HCN2Q9UL51 889 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 USP18Q9UMW8 372 aa14.79□□□□□ -0.04
LIG1-208ENST00000595758 CACNA1IQ9P0X4 2223 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 LRIG2O94898 1065 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms