RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 TTC39BQ5VTQ0 682 aaPredicted RBP23.62■■□□□ 1.37
PNKP-205ENST00000595081 FAM72DQ6L9T8 149 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 ANKS1BQ7Z6G8 1248 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 FAM72BQ86X60 149 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 CCAR2Q8N163 923 aaKnown RBP23.62■■□□□ 1.37
PNKP-205ENST00000595081 RPLP0P6Q8NHW5 317 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 EIF3CQ99613 913 aaKnown RBP23.62■■□□□ 1.37
PNKP-205ENST00000595081 ZDHHC4Q9NPG8 344 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 SPATA6Q9NWH7 488 aaPredicted RBP23.62■■□□□ 1.37
PNKP-205ENST00000595081 GPATCH2LQ9NWQ4 482 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 OR12D3Q9UGF7 316 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 IP6K2Q9UHH9 426 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 TFR2Q9UP52 801 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 PCDHA13Q9Y5I0 950 aa23.62■■□□□ 1.37
PNKP-205ENST00000595081 A0A1B0GVM2 712 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 TCAF2A6NFQ2 919 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 H0Y626 953 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 MYO1FO00160 1098 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 CNTN5O94779 1100 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 PIGHQ14442 188 aaPredicted RBP23.61■■□□□ 1.37
PNKP-205ENST00000595081 C5orf22Q49AR2 442 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 ALFQ53S48 1182 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 EFHC2Q5JST6 749 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 LRRC31Q6UY01 552 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 PYROXD2Q8N2H3 581 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 FIBINQ8TAL6 211 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 SLC35G2Q8TBE7 412 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 USP33Q8TEY7 942 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 OSBPL2Q9H1P3 480 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 C2orf42Q9NWW7 574 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 MPP6Q9NZW5 540 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 GGA2Q9UJY4 613 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 HCN2Q9UL51 889 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 INTUQ9ULD6 942 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 FZD10Q9ULW2 581 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 ATG2BQ96BY7 2078 aa23.61■■□□□ 1.37
PNKP-205ENST00000595081 IGLV3-10A0A075B6K4 115 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 DRGXA6NNA5 263 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 PABPC1P11940 636 aaKnown RBP23.6■■□□□ 1.37
PNKP-205ENST00000595081 TCF4P15884 667 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 TIE1P35590 1138 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 KIR2DL1P43626 348 aaPredicted RBP23.6■■□□□ 1.37
PNKP-205ENST00000595081 LMAN2Q12907 356 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 ACBD5Q5T8D3 534 aaPredicted RBP23.6■■□□□ 1.37
PNKP-205ENST00000595081 TMEM215Q68D42 235 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 NUDT18Q6ZVK8 323 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 CYP4V2Q6ZWL3 525 aaPredicted RBP23.6■■□□□ 1.37
PNKP-205ENST00000595081 CPNE8Q86YQ8 564 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 NIPA2Q8N8Q9 360 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 RFFLQ8WZ73 363 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 LMLNQ96KR4 655 aa23.6■■□□□ 1.37
PNKP-205ENST00000595081 POLR3BQ9NW08 1133 aaPredicted RBP23.6■■□□□ 1.37
PNKP-205ENST00000595081 REXO2Q9Y3B8 237 aaKnown RBP23.6■■□□□ 1.37
PNKP-205ENST00000595081 PRPSAP2O60256 369 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 MRE11P49959 708 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 NRG1Q02297 640 aaPredicted RBP23.59■■□□□ 1.37
PNKP-205ENST00000595081 ACAP1Q15027 740 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 MANEALQ5VSG8 457 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 EGFLAMQ63HQ2 1017 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 CHST9Q7L1S5 443 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 TFAP2DQ7Z6R9 452 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 CCDC117Q8IWD4 279 aaPredicted RBP23.59■■□□□ 1.37
PNKP-205ENST00000595081 ALLCQ8N6M5 410 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.59■■□□□ 1.37
PNKP-205ENST00000595081 ACRBPQ8NEB7 543 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 SNRNP25Q9BV90 132 aaKnown RBP23.59■■□□□ 1.37
PNKP-205ENST00000595081 USP18Q9UMW8 372 aa23.59■■□□□ 1.37
PNKP-205ENST00000595081 TMEM110-MUSTN1A8MSY1 372 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 LRIG2O94898 1065 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 IPO7O95373 1038 aaKnown RBP23.58■■□□□ 1.37
PNKP-205ENST00000595081 IL1R2P27930 398 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 PCK1P35558 622 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 NUMBP49757 651 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 AIF1P55008 147 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 CDH4P55283 916 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 CA9Q16790 459 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 FUT11Q495W5 492 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 CXorf57Q6NSI4 855 aaKnown RBP23.58■■□□□ 1.37
PNKP-205ENST00000595081 RWDD4Q6NW29 188 aaKnown RBP23.58■■□□□ 1.37
PNKP-205ENST00000595081 KIAA0907Q7Z7F0 614 aaPredicted RBP23.58■■□□□ 1.37
PNKP-205ENST00000595081 C1orf210Q8IVY1 113 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 SPEM1Q8N4L4 309 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 CCDC33Q8N5R6 958 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 ZNF513Q8N8E2 541 aaPredicted RBP23.58■■□□□ 1.37
PNKP-205ENST00000595081 ZNF557Q8N988 423 aaPredicted RBP23.58■■□□□ 1.37
PNKP-205ENST00000595081 SORCS1Q8WY21 1168 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 IER2Q9BTL4 223 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 CIPCQ9C0C6 399 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 AP4E1Q9UPM8 1137 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 STARD13Q9Y3M8 1113 aa23.58■■□□□ 1.37
PNKP-205ENST00000595081 WDFY4Q6ZS81 3184 aa23.58■■□□□ 1.36
PNKP-205ENST00000595081 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.57■■□□□ 1.36
PNKP-205ENST00000595081 GALR2O43603 387 aaPredicted RBP23.57■■□□□ 1.36
PNKP-205ENST00000595081 CLDN11O75508 207 aa23.57■■□□□ 1.36
PNKP-205ENST00000595081 MTA2O94776 668 aa23.57■■□□□ 1.36
PNKP-205ENST00000595081 PROSCO94903 275 aa23.57■■□□□ 1.36
PNKP-205ENST00000595081 KLF8O95600 359 aaPredicted RBP23.57■■□□□ 1.36
PNKP-205ENST00000595081 MRPS21P82921 87 aaKnown RBP23.57■■□□□ 1.36
PNKP-205ENST00000595081 SATB1Q01826 763 aa23.57■■□□□ 1.36
PNKP-205ENST00000595081 ZNF177Q13360 481 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms