RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 F5H5T6 163 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 ZBTB24O43167 697 aaPredicted RBP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 LUC7L3O95232 432 aaKnown RBP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 CYP1A1P04798 512 aaPredicted RBP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 CHRNB2P17787 502 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 ABCB4P21439 1286 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 PRKCHP24723 683 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 MPLP40238 635 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 SULT1E1P49888 294 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 ARID5AQ03989 594 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 NME3Q13232 169 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 CDH18Q13634 790 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 BYSLQ13895 437 aaKnown RBP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 FUT11Q495W5 492 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 C2CD6Q53TS8 623 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 MBLAC2Q68D91 279 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 SERPINA13PQ6UXR4 307 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 TRIM72Q6ZMU5 477 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 FIBINQ8TAL6 211 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 CPA5Q8WXQ8 436 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 COL26A1Q96A83 441 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 LMLNQ96KR4 655 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 MRGPRX1Q96LB2 322 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 NPY6RQ99463 290 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 PRMT1Q99873 361 aaKnown RBP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 ADAM33Q9BZ11 813 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 SLC12A6Q9UHW9 1150 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 MBD1Q9UIS9 605 aaPredicted RBP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 GCN1Q92616 2671 aaKnown RBP15.63■□□□□ 0.09
TRIM28-205ENST00000595028 C1QTNF9BB2RNN3 333 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 GOLGA8SH3BPF8 625 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 M0QYT0 321 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 FOXD2O60548 495 aaPredicted RBP15.62■□□□□ 0.09
TRIM28-205ENST00000595028 C1QTNF9P0C862 333 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 FLT3P36888 993 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
TRIM28-205ENST00000595028 LMAN2Q12907 356 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 MTA1Q13330 715 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 IQCB1Q15051 598 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 PTPRNQ16849 979 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 PLA2G2CQ5R387 149 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 MMS22LQ6ZRQ5 1243 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 CCDC117Q8IWD4 279 aaPredicted RBP15.62■□□□□ 0.09
TRIM28-205ENST00000595028 CFAP52Q8N1V2 620 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 CARNMT1Q8N4J0 409 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 FRMD1Q8N878 549 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 CYB5D2Q8WUJ1 264 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 RNF34Q969K3 372 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 NT5C3BQ969T7 300 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 SLC6A17Q9H1V8 727 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 RTN4Q9NQC3 1192 aaKnown RBP15.62■□□□□ 0.09
TRIM28-205ENST00000595028 AKAP13Q12802 2813 aa15.62■□□□□ 0.09
TRIM28-205ENST00000595028 BCLAF3A2AJT9 711 aaKnown RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 TM4SF5O14894 197 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 TEX33O43247 280 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 SYNCRIPO60506 623 aaKnown RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 ZNF217O75362 1048 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 EPHX1P07099 455 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 DLDP09622 509 aaKnown RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 ZNF806P0C7X5 589 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 HLA-EP13747 358 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 POLR2EP19388 210 aaKnown RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 TFE3P19532 575 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 PTMSP20962 102 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 MMP8P22894 467 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 DHPSP49366 369 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 CREB5Q02930 508 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 CCDC6Q16204 474 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 FNDC3BQ53EP0 1204 aaKnown RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 RABGAP1LQ5R372 815 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 TTC39BQ5VTQ0 682 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 KIAA1324Q6UXG2 1013 aaKnown RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 CYP2U1Q7Z449 544 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 PGAP3Q96FM1 320 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 C11orf70Q9BRQ4 267 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 MKRN2Q9H000 416 aaKnown RBP15.61■□□□□ 0.09
TRIM28-205ENST00000595028 TMEM245Q9H330 911 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 VPS45Q9NRW7 570 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 PIGVQ9NUD9 493 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 CYP8B1Q9UNU6 501 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 DMXL2Q8TDJ6 3036 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 PI4KAP42356 2102 aa15.61■□□□□ 0.09
TRIM28-205ENST00000595028 IGHV1OR15-9A0A0B4J2B8 117 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 A0A1B0GVM2 712 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 TCAF2A6NFQ2 919 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 H0Y626 953 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 MAP3K13O43283 966 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 PAGE1O75459 146 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 ASLP04424 464 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 ATP5BP06576 529 aaKnown RBP15.6■□□□□ 0.09
TRIM28-205ENST00000595028 UNGP13051 313 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-205ENST00000595028 CSKP41240 450 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 CXCR3P49682 368 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 COPAP53621 1224 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 LIMK1P53667 647 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 CENPCQ03188 943 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 SF3A2Q15428 464 aaKnown RBP15.6■□□□□ 0.09
TRIM28-205ENST00000595028 SLC25A52Q3SY17 297 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 AASDHQ4L235 1098 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms