RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PEBP4Q96S96 227 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 HNRNPABQ99729 332 aaKnown RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 ARPC5LQ9BPX5 153 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 CNPY3Q9BT09 278 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 ASNSD1Q9NWL6 643 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 KIAA1522Q9P206 1035 aaPredicted RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 ZNF180Q9UJW8 692 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 A0A0U1RQF3 1178 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 MOXD2PA6NHM9 499 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 FOXO6A8MYZ6 492 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 E9PBE3 544 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 GYG2O15488 501 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 CD48P09326 243 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 ETS1P14921 441 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 RPL26P61254 145 aaKnown RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 TBL3Q12788 808 aaKnown RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 THOC5Q13769 683 aaKnown RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 CDO1Q16878 200 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 KIAA0319Q5VV43 1072 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 KLHL35Q6PF15 583 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 BBS5Q8N3I7 341 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 TNIP3Q96KP6 325 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 CFAP57Q96MR6 1250 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 RSAD1Q9HA92 442 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 USP18Q9UMW8 372 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 DRG1Q9Y295 367 aaKnown RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 FRMPD3Q5JV73 1810 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 A0A1W2PQ45 241 aaPredicted RBP15.81■□□□□ 0.12
PNKP-204ENST00000594661 A0A1W2PQY0 241 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 GABRDO14764 452 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 TRUB2O95900 331 aaKnown RBP15.81■□□□□ 0.12
PNKP-204ENST00000594661 POMCP01189 267 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 CKBP12277 381 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 KDELR1P24390 212 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 SLC18A1P54219 525 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 GPS1Q13098 491 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 ACAP1Q15027 740 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 OASLQ15646 514 aaKnown RBP15.81■□□□□ 0.12
PNKP-204ENST00000594661 PDK4Q16654 411 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 CCDC14Q49A88 953 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 C1orf228Q6PIY5 440 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 TRAF7Q6Q0C0 670 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 CYP4V2Q6ZWL3 525 aaPredicted RBP15.81■□□□□ 0.12
PNKP-204ENST00000594661 ZNF296Q8WUU4 475 aaPredicted RBP15.81■□□□□ 0.12
PNKP-204ENST00000594661 MCUR1Q96AQ8 359 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 TMEM121Q9BTD3 319 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 RBM38Q9H0Z9 239 aaKnown RBP15.81■□□□□ 0.12
PNKP-204ENST00000594661 EBF3Q9H4W6 596 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 NINJ2Q9NZG7 142 aa15.81■□□□□ 0.12
PNKP-204ENST00000594661 TIMM13Q9Y5L4 95 aaPredicted RBP15.81■□□□□ 0.12
PNKP-204ENST00000594661 SGK1O00141 431 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 CLDN5O00501 218 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 DNALI1O14645 258 aaPredicted RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 BUD23O43709 281 aaKnown RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 SERPINB7O75635 380 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 GNRH1P01148 92 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 ITGAVP06756 1048 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 LCP1P13796 627 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 RPL34P49207 117 aaKnown RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 TRIM67Q6ZTA4 783 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 ADGRG6Q86SQ4 1221 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 MTDHQ86UE4 582 aaKnown RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 PDSS2Q86YH6 399 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 KCTD6Q8NC69 237 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 DENND1AQ8TEH3 1009 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 HSPH1Q92598 858 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 NKD2Q969F2 451 aaPredicted RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 NSL1Q96IY1 281 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 HMX1Q9NP08 348 aaPredicted RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 SLCO1B3Q9NPD5 702 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 NDE1Q9NXR1 346 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 SAE1Q9UBE0 346 aaPredicted RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 ZNF711Q9Y462 761 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 NR2E3Q9Y5X4 410 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 NUMBLQ9Y6R0 609 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 DPYSL4O14531 572 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 CST8O60676 142 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 IFNB1P01574 187 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 NAT1P18440 290 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 HALP42357 657 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 MBTPS1Q14703 1052 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 UPP1Q16831 310 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 LRRC8BQ6P9F7 803 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 KLHDC10Q6PID8 442 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 RBM44Q6ZP01 1051 aaKnown RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 PAQR9Q6ZVX9 377 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 TREML1Q86YW5 311 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 VPS52Q8N1B4 723 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 ARHGAP24Q8N264 748 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 ZCCHC9Q8N567 271 aaKnown RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 SLAIN1Q8ND83 568 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 RBM15Q96T37 977 aaKnown RBP eCLIP15.8■□□□□ 0.12
PNKP-204ENST00000594661 TSEN34Q9BSV6 310 aaKnown RBP15.8■□□□□ 0.12
PNKP-204ENST00000594661 NACA2Q9H009 215 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 ARL8BQ9NVJ2 186 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 EURLQ9NYK6 297 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 CROTQ9UKG9 612 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 SSX2IPQ9Y2D8 614 aa15.8■□□□□ 0.12
PNKP-204ENST00000594661 INPP5FQ9Y2H2 1132 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms