RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 EGFLAMQ63HQ2 1017 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 CHST9Q7L1S5 443 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 FAM131BQ86XD5 332 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 TSTD1Q8NFU3 115 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 FAM172AQ8WUF8 416 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 MYEOVQ96EZ4 313 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 PPP1R9BQ96SB3 815 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 CNPY3Q9BT09 278 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 CIPCQ9C0C6 399 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 ABHD10Q9NUJ1 306 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 VANGL2Q9ULK5 521 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 PLA2G4CQ9UP65 541 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 A0A087X0T9 212 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 A0A1B0GVM2 712 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 TCAF2A6NFQ2 919 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 AKR1B15C9JRZ8 316 aaPredicted RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 PROB1E7EW31 1015 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ZBTB24O43167 697 aaPredicted RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 ADAM23O75077 832 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 MFAP3LO75121 409 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 MOCS3O95396 460 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ATP5BP06576 529 aaKnown RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 FAM228BP0C875 321 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 CHRM1P11229 460 aaPredicted RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 POLR2EP19388 210 aaKnown RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 ADRA1BP35368 520 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 FNTBP49356 437 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ADKP55263 362 aaKnown RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 C5orf22Q49AR2 442 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 CCDC122Q5T0U0 273 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ALKBH5Q6P6C2 394 aaKnown RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 TMC6Q7Z403 805 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ADIPOR2Q86V24 386 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 WDR5BQ86VZ2 330 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 CCAR2Q8N163 923 aaKnown RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 IGSF8Q969P0 613 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ZNF653Q96CK0 615 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 HHIPQ96QV1 700 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 DEF6Q9H4E7 631 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ZDHHC4Q9NPG8 344 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 ANLNQ9NQW6 1124 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 POLR3BQ9NW08 1133 aaPredicted RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 THAP10Q9P2Z0 257 aaPredicted RBP15.51■□□□□ 0.07
UPF1-202ENST00000594243 EBF1Q9UH73 591 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 HCN2Q9UL51 889 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 R4GN57 208 aa15.51■□□□□ 0.07
UPF1-202ENST00000594243 F5P12259 2224 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.5■□□□□ 0.07
UPF1-202ENST00000594243 SSU72P8A0A1W2PR75 194 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 TMEM191CA6NGB0 347 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 DRGXA6NNA5 263 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 I6L893 689 aaPredicted RBP15.5■□□□□ 0.07
UPF1-202ENST00000594243 CCP110O43303 1012 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 LILRB5O75023 590 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 CLDN11O75508 207 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 HOXB2P14652 356 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 CD70P32970 193 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 EIF4A3P38919 411 aaKnown RBP15.5■□□□□ 0.07
UPF1-202ENST00000594243 MRE11P49959 708 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 CDH4P55283 916 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 HDAC4P56524 1084 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 LMAN2Q12907 356 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 TBX2Q13207 712 aaPredicted RBP15.5■□□□□ 0.07
UPF1-202ENST00000594243 ZNF177Q13360 481 aaPredicted RBP15.5■□□□□ 0.07
UPF1-202ENST00000594243 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
UPF1-202ENST00000594243 TMEM215Q68D42 235 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 MBLAC2Q68D91 279 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 HEATR6Q6AI08 1181 aaKnown RBP15.5■□□□□ 0.07
UPF1-202ENST00000594243 TMEM92Q6UXU6 159 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 C14orf80Q86SX3 495 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 DNAAF5Q86Y56 855 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 WFDC5Q8TCV5 224 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 NTAN1Q96AB6 310 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 MRFAP1L1Q96HT8 127 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 LMLNQ96KR4 655 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 ACOX2Q99424 681 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 PHOX2BQ99453 314 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 GABRG3Q99928 467 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 OSBPL2Q9H1P3 480 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 MYO1AQ9UBC5 1043 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 STON1Q9Y6Q2 735 aa15.5■□□□□ 0.07
UPF1-202ENST00000594243 E9PAM4 449 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 AXIN1O15169 862 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 ATMINO43313 823 aaPredicted RBP15.49■□□□□ 0.07
UPF1-202ENST00000594243 SRGAP2O75044 1071 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 DLDP09622 509 aaKnown RBP15.49■□□□□ 0.07
UPF1-202ENST00000594243 PSMA2P25787 234 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 WASP42768 502 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 PXNP49023 591 aaPredicted RBP15.49■□□□□ 0.07
UPF1-202ENST00000594243 ZNF75DP51815 510 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 AIF1P55008 147 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 DMWDQ09019 674 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 ENPP2Q13822 863 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 SLC18A3Q16572 532 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 RAB6CQ53S08 254 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 FSCBQ5H9T9 825 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 SCYL2Q6P3W7 929 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 SLFN11Q7Z7L1 901 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 FNIP1Q8TF40 1166 aa15.49■□□□□ 0.07
UPF1-202ENST00000594243 NKD2Q969F2 451 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms