RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 CIR1Q86X95 450 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-244ENST00000593283 CCDC117Q8IWD4 279 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-244ENST00000593283 ZNF397Q8NF99 534 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-244ENST00000593283 OR2T3Q8NH03 318 aa18.33■□□□□ 0.52
CIRBP-244ENST00000593283 EPS8L1Q8TE68 723 aa18.33■□□□□ 0.52
CIRBP-244ENST00000593283 PRCCQ92733 491 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-244ENST00000593283 RNF34Q969K3 372 aa18.33■□□□□ 0.52
CIRBP-244ENST00000593283 PRMT1Q99873 361 aaKnown RBP18.33■□□□□ 0.52
CIRBP-244ENST00000593283 FAM207AQ9NSI2 230 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-244ENST00000593283 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.33■□□□□ 0.52
CIRBP-244ENST00000593283 C4orf47A7E2U8 309 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 KCNU1A8MYU2 1149 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 LSM8O95777 96 aaKnown RBP18.32■□□□□ 0.52
CIRBP-244ENST00000593283 CFIP05156 583 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 ABCB4P21439 1286 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 CCR1P32246 355 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 TPMTP51580 245 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 COPB1P53618 953 aaKnown RBP18.32■□□□□ 0.52
CIRBP-244ENST00000593283 NME3Q13232 169 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 PITRM1Q5JRX3 1037 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 ZDHHC17Q8IUH5 632 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 SLC20A1Q8WUM9 679 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 TTC17Q96AE7 1141 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 TOE1Q96GM8 510 aaKnown RBP18.32■□□□□ 0.52
CIRBP-244ENST00000593283 ADAM33Q9BZ11 813 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 SLC12A6Q9UHW9 1150 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 NOCTQ9UK39 431 aaKnown RBP18.32■□□□□ 0.52
CIRBP-244ENST00000593283 SIK3Q9Y2K2 1263 aa18.32■□□□□ 0.52
CIRBP-244ENST00000593283 DOCK4Q8N1I0 1966 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 LGALS16A8MUM7 142 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 H0Y626 953 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 TM4SF5O14894 197 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 GFPT2O94808 682 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 MMEP08473 750 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 TFE3P19532 575 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-244ENST00000593283 GGCXP38435 758 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 MATKP42679 507 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 POLR2FP61218 127 aaKnown RBP18.31■□□□□ 0.52
CIRBP-244ENST00000593283 NOMO3P69849 1222 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 CENPCQ03188 943 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 C2CD6Q53TS8 623 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 FAM102AQ5T9C2 384 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-244ENST00000593283 NAA35Q5VZE5 725 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 XYLT1Q86Y38 959 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 MYO19Q96H55 970 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 NUSAP1Q9BXS6 441 aaKnown RBP18.31■□□□□ 0.52
CIRBP-244ENST00000593283 MTG2Q9H4K7 406 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 NLRC4Q9NPP4 1024 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 TMEM9BQ9NQ34 198 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 PRSS16Q9NQE7 514 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 FSCN3Q9NQT6 498 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 ITM2CQ9NQX7 267 aa18.31■□□□□ 0.52
CIRBP-244ENST00000593283 WSB2Q9NYS7 404 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-244ENST00000593283 LIMA1Q9UHB6 759 aaKnown RBP18.31■□□□□ 0.52
CIRBP-244ENST00000593283 M0QYT0 321 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 CDX4O14627 284 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-244ENST00000593283 IGLV3-19P01714 112 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 ASLP04424 464 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 ACADMP11310 421 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 NOS2P35228 1153 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 SCNN1AP37088 669 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 CTSOP43234 321 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-244ENST00000593283 GABRB2P47870 512 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 SULT1E1P49888 294 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 IRAK1P51617 712 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 JAM2P57087 298 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
CIRBP-244ENST00000593283 TYRO3Q06418 890 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 SYCP1Q15431 976 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 DUOXA1Q1HG43 343 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 PLEKHG6Q3KR16 790 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 RABGAP1LQ5R372 815 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 SLC23A3Q6PIS1 610 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 FAM124AQ86V42 546 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 ERICH1Q86X53 443 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 ANKRD20A12PQ8NF67 263 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 C18orf8Q96DM3 657 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 ZNF419Q96HQ0 510 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-244ENST00000593283 MRGPRX3Q96LB0 322 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 NPY6RQ99463 290 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 GPR174Q9BXC1 333 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 FBRSQ9HAH7 460 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 PIGVQ9NUD9 493 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.3■□□□□ 0.52
CIRBP-244ENST00000593283 TMEM63CQ9P1W3 806 aa18.3■□□□□ 0.52
CIRBP-244ENST00000593283 KNL1Q8NG31 2342 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 A0A1B0GVM2 712 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 TCAF2A6NFQ2 919 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 MEI4A8MW99 385 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 GOLGA8SH3BPF8 625 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 MOCS3O95396 460 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 ZNF18P17022 549 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 ENGP17813 658 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 SOX5P35711 763 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 MAPK8P45983 427 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 NUMBP49757 651 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 ST8SIA6P61647 398 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 NCAPHQ15003 741 aa18.29■□□□□ 0.52
CIRBP-244ENST00000593283 TTC39BQ5VTQ0 682 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-244ENST00000593283 FBXL22Q6P050 247 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms