RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 MS4A13Q5J8X5 152 aa21.22■□□□□ 0.99
TRIM47-207ENST00000593089 SYPL2Q5VXT5 272 aa21.22■□□□□ 0.99
TRIM47-207ENST00000593089 MMS22LQ6ZRQ5 1243 aa21.22■□□□□ 0.99
TRIM47-207ENST00000593089 CCDC117Q8IWD4 279 aaPredicted RBP21.22■□□□□ 0.99
TRIM47-207ENST00000593089 MYO19Q96H55 970 aa21.22■□□□□ 0.99
TRIM47-207ENST00000593089 SLC39A13Q96H72 371 aa21.22■□□□□ 0.99
TRIM47-207ENST00000593089 XPO7Q9UIA9 1087 aaKnown RBP21.22■□□□□ 0.99
TRIM47-207ENST00000593089 CNTN6Q9UQ52 1028 aa21.22■□□□□ 0.99
TRIM47-207ENST00000593089 FAM221BA6H8Z2 402 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 SRRM3A6NNA2 597 aaPredicted RBP21.21■□□□□ 0.99
TRIM47-207ENST00000593089 CBFA2T3O75081 653 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 ASLP04424 464 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 ZNF883P0CG24 379 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 NNTQ13423 1086 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 TEAD4Q15561 434 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 DCAF6Q58WW2 860 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 FSCBQ5H9T9 825 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 DHX40Q8IX18 779 aaKnown RBP21.21■□□□□ 0.99
TRIM47-207ENST00000593089 GANCQ8TET4 914 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 ADAMTS14Q8WXS8 1223 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 RSPH9Q9H1X1 276 aaPredicted RBP21.21■□□□□ 0.99
TRIM47-207ENST00000593089 SGK2Q9HBY8 427 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 TM9SF3Q9HD45 589 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 CYTH4Q9UIA0 394 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 NCKAP1Q9Y2A7 1128 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 SNX11Q9Y5W9 270 aa21.21■□□□□ 0.99
TRIM47-207ENST00000593089 WDFY3Q8IZQ1 3526 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 CHD6Q8TD26 2715 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 E5RJQ4 531 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 PAPSS1O43252 624 aaPredicted RBP21.2■□□□□ 0.98
TRIM47-207ENST00000593089 THAP12O43422 761 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 MED7O43513 233 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 SIN3BO75182 1162 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 LUC7L3O95232 432 aaKnown RBP21.2■□□□□ 0.98
TRIM47-207ENST00000593089 APOEP02649 317 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 KIF19Q2TAC6 998 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 PITRM1Q5JRX3 1037 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 RAP1GAP2Q684P5 730 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 LAYNQ6UX15 382 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 LGI2Q8N0V4 545 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 MRGPRX3Q96LB0 322 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 SLC4A5Q9BY07 1137 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 PABPC3Q9H361 631 aaKnown RBP21.2■□□□□ 0.98
TRIM47-207ENST00000593089 ACP6Q9NPH0 428 aa21.2■□□□□ 0.98
TRIM47-207ENST00000593089 APOBEC2Q9Y235 224 aaKnown RBP21.2■□□□□ 0.98
TRIM47-207ENST00000593089 FAM47DPA6NHR8 397 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 GNA15P30679 374 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 CTSOP43234 321 aaPredicted RBP21.19■□□□□ 0.98
TRIM47-207ENST00000593089 HNRNPA1L2Q32P51 320 aaKnown RBP21.19■□□□□ 0.98
TRIM47-207ENST00000593089 ZC3H12AQ5D1E8 599 aaKnown RBP21.19■□□□□ 0.98
TRIM47-207ENST00000593089 GJB7Q6PEY0 223 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 GLRX5Q86SX6 157 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 SLCO6A1Q86UG4 719 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 CHSY1Q86X52 802 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 CREBRFQ8IUR6 639 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 RHBDD1Q8TEB9 315 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 STK32AQ8WU08 396 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 ZNF606Q8WXB4 792 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 CRACR2AQ9BSW2 395 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 TRIM62Q9BVG3 475 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 POPDC2Q9HBU9 364 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 OSGEPQ9NPF4 335 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 FBXL12Q9NXK8 326 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 TJP2Q9UDY2 1190 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 ERVW-1Q9UQF0 538 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 ANKRD6Q9Y2G4 727 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 CEP83Q9Y592 693 aa21.19■□□□□ 0.98
TRIM47-207ENST00000593089 PLXNA2O75051 1894 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 NYNRINQ9P2P1 1898 aaKnown RBP21.18■□□□□ 0.98
TRIM47-207ENST00000593089 TTC34A8MYJ7 566 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 KCNK3O14649 394 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 FLRT2O43155 660 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 RNASEH1O60930 286 aaKnown RBP21.18■□□□□ 0.98
TRIM47-207ENST00000593089 MOCS3O95396 460 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 TRUB2O95900 331 aaKnown RBP21.18■□□□□ 0.98
TRIM47-207ENST00000593089 TACR2P21452 398 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 CD27P26842 260 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 GRIA4P48058 902 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 NUMBP49757 651 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 YWHAZP63104 245 aaKnown RBP21.18■□□□□ 0.98
TRIM47-207ENST00000593089 KIAA0895LQ68EN5 471 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 USP30Q70CQ3 517 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 BEND5Q7L4P6 421 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 KIAA1522Q9P206 1035 aaPredicted RBP21.18■□□□□ 0.98
TRIM47-207ENST00000593089 SERGEFQ9UGK8 458 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 SCML1Q9UN30 329 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 PCDHGB2Q9Y5G2 931 aa21.18■□□□□ 0.98
TRIM47-207ENST00000593089 TP53BP1Q12888 1972 aaPredicted RBP21.17■□□□□ 0.98
TRIM47-207ENST00000593089 A0A1W2PP55 124 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 MID1O15344 667 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 FGFR1OPO95684 399 aaKnown RBP21.17■□□□□ 0.98
TRIM47-207ENST00000593089 USP8P40818 1118 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 PITX1P78337 314 aaPredicted RBP21.17■□□□□ 0.98
TRIM47-207ENST00000593089 CST6Q15828 149 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 MEA1Q16626 185 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 ARHGAP44Q17R89 818 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 C9orf64Q5T6V5 341 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 DBX2Q6ZNG2 339 aa21.17■□□□□ 0.98
TRIM47-207ENST00000593089 ADAT2Q7Z6V5 191 aaKnown RBP21.17■□□□□ 0.98
TRIM47-207ENST00000593089 TMEM110Q86TL2 294 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms