RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	TAB2	Q9NYJ8	693 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SUSD2	Q9UGT4	822 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC12A6	Q9UHW9	1150 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	NFE2L3	Q9Y4A8	694 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FAM170A	A1A519	330 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053		F5H5T6	163 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ARHGAP33	O14559	1287 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	LUC7L3	O95232	432 aa	Known RBP	13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ASL	P04424	464 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC2A3	P11169	496 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GNS	P15586	552 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CSRP1	P21291	193 aa	Known RBP	13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ABCB4	P21439	1286 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	EEF1G	P26641	437 aa	Known RBP	13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PML	P29590	882 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CCR1	P32246	355 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SNX16	P57768	344 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ST8SIA6	P61647	398 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	RPS14	P62263	151 aa	Known RBP	13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	NME3	Q13232	169 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PLEKHG6	Q3KR16	790 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PITRM1	Q5JRX3	1037 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CIR1	Q86X95	450 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	OR2I1P	Q8NGU4	316 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DNASE2B	Q8WZ79	361 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MIR1-1HG	Q9H1L0	117 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FBRS	Q9HAH7	460 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SUN2	Q9UH99	717 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PLXND1	Q9Y4D7	1925 aa		13.54	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CNOT1	A5YKK6	2376 aa	Known RBP	13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	METTL12	A8MUP2	240 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DAB1	O75553	588 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MOCS3	O95396	460 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SYP	P08247	313 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CEACAM1	P13688	526 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	UCHL3	P15374	230 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CYP11B1	P15538	503 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CTSO	P43234	321 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC6A3	Q01959	620 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ZNF252P-AS1	Q0IIN9	211 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DCAF12L1	Q5VU92	463 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TAF3	Q5VWG9	929 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ZNF776	Q68DI1	518 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC26A9	Q7LBE3	791 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	HDDC3	Q8N4P3	179 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ZCCHC9	Q8N567	271 aa	Known RBP	13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MINDY1	Q8N5J2	469 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TMEM35B	Q8NCS4	154 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DEFB124	Q8NES8	71 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ENOX1	Q8TC92	643 aa	Known RBP	13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GPT2	Q8TD30	523 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MYO19	Q96H55	970 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MRGPRX3	Q96LB0	322 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GBP4	Q96PP9	640 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PRMT1	Q99873	361 aa	Known RBP	13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	NAA15	Q9BXJ9	866 aa	Known RBP	13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ANGPTL2	Q9UKU9	493 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ERVW-1	Q9UQF0	538 aa		13.53	□□□□□ -0.24
PRKCSH-218	ENST00000593053	NUP205	Q92621	2012 aa		13.52	□□□□□ -0.24
PRKCSH-218	ENST00000593053		A0A1B0GTW7	788 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	OPHN1	O60890	802 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	SIN3B	O75182	1162 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	DNTT	P04053	509 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	ACSL1	P33121	698 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	NOS2	P35228	1153 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	NUMB	P49757	651 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	RNASE9	P60153	205 aa	Known RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	ECT2L	Q008S8	904 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	ZBTB16	Q05516	673 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	RABGAP1L	Q5R372	815 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	RNF219	Q5W0B1	726 aa	Predicted RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	FBXL22	Q6P050	247 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	ZDHHC17	Q8IUH5	632 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	DHX40	Q8IX18	779 aa	Known RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	APCDD1	Q8J025	514 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	CCAR2	Q8N163	923 aa	Known RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	ZNF397	Q8NF99	534 aa	Predicted RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	SNX19	Q92543	992 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	RPRD1A	Q96P16	312 aa	Predicted RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	VPS16	Q9H269	839 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	EIF2B4	Q9UI10	523 aa	Known RBP	13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	GON4L	Q3T8J9	2241 aa		13.52	□□□□□ -0.25
PRKCSH-218	ENST00000593053	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053		A0A1B0GVM2	712 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	TCAF2	A6NFQ2	919 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	TTC34	A8MYJ7	566 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053		F8VZ95	297 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053		M0QYT0	321 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	SRPRA	P08240	638 aa	Known RBP	13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	C7	P10643	843 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	PDGFRA	P16234	1089 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	CDH5	P33151	784 aa	Predicted RBP	13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	GGCX	P38435	758 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	MATK	P42679	507 aa		13.51	□□□□□ -0.25
PRKCSH-218	ENST00000593053	CENPC	Q03188	943 aa		13.51	□□□□□ -0.25

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