RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 MS4A13Q5J8X5 152 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 STPG1Q5TH74 334 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 E4F1Q66K89 784 aaPredicted RBP14.41□□□□□ -0.1
CLIP3-205ENST00000592017 SND1Q7KZF4 910 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLIP3-205ENST00000592017 LPCAT2Q7L5N7 544 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 CCDC117Q8IWD4 279 aaPredicted RBP14.41□□□□□ -0.1
CLIP3-205ENST00000592017 CARNMT1Q8N4J0 409 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 WFDC5Q8TCV5 224 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 UCMAQ8WVF2 138 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 SORCS1Q8WY21 1168 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 CFAP57Q96MR6 1250 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 NPY6RQ99463 290 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 SLC2A11Q9BYW1 496 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 ADAM33Q9BZ11 813 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 PIGVQ9NUD9 493 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 ELOVL2Q9NXB9 296 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 THAP10Q9P2Z0 257 aaPredicted RBP14.41□□□□□ -0.1
CLIP3-205ENST00000592017 GGA2Q9UJY4 613 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 LAMA1P25391 3075 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 TMCO5BA8MYB1 307 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 PATE3B3GLJ2 98 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 CALB1P05937 261 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 TPM3P06753 285 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 TNFAIP3P21580 790 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 HLA-FP30511 346 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 IL12RB1P42701 662 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 LIMK1P53667 647 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 EIF4EBP2Q13542 120 aaPredicted RBP14.4□□□□□ -0.1
CLIP3-205ENST00000592017 CDH18Q13634 790 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 ENPP2Q13822 863 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 BYSLQ13895 437 aaKnown RBP14.4□□□□□ -0.1
CLIP3-205ENST00000592017 SLC25A52Q3SY17 297 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 TRNP1Q6NT89 227 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 CHST9Q7L1S5 443 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 ARMCX6Q7L4S7 300 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 CYP2U1Q7Z449 544 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 IRF2BP2Q7Z5L9 587 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 CIR1Q86X95 450 aaPredicted RBP14.4□□□□□ -0.1
CLIP3-205ENST00000592017 DEFB119Q8N690 84 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 CPLX3Q8WVH0 158 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 PIGKQ92643 395 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 SPACA7Q96KW9 195 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 MRGPRX1Q96LB2 322 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 NUP58Q9BVL2 599 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 SELENOOQ9BVL4 669 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 HAUS4Q9H6D7 363 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 WDCPQ9H6R7 721 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 TMEM59LQ9UK28 342 aa14.4□□□□□ -0.1
CLIP3-205ENST00000592017 CNOT1A5YKK6 2376 aaKnown RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 MYO18AQ92614 2054 aaKnown RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 H0Y626 953 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 PABPC1P11940 636 aaKnown RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 CD70P32970 193 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 RDXP35241 583 aaKnown RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 PBX1P40424 430 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 ATP11AP98196 1134 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 PTP4A2Q12974 167 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 CDO1Q16878 200 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 FUT11Q495W5 492 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 TDRD12Q587J7 1177 aaKnown RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 FIGNQ5HY92 759 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 MPP7Q5T2T1 576 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 RNF43Q68DV7 783 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 DNAJC24Q6P3W2 148 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 MON1BQ7L1V2 547 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 PHF13Q86YI8 300 aaPredicted RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 AHI1Q8N157 1196 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 JOSD2Q8TAC2 188 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 WFIKKN2Q8TEU8 576 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 RPRD1AQ96P16 312 aaPredicted RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 IRX2Q9BZI1 471 aaPredicted RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 XPO4Q9C0E2 1151 aaKnown RBP14.39□□□□□ -0.11
CLIP3-205ENST00000592017 TKTL2Q9H0I9 626 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 SIK2Q9H0K1 926 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 CD93Q9NPY3 652 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 TMEM74BQ9NUR3 256 aa14.39□□□□□ -0.11
CLIP3-205ENST00000592017 EML5Q05BV3 1969 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 IGHV1OR15-9A0A0B4J2B8 117 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 LNP1A1A4G5 178 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 KHNYNO15037 678 aaKnown RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 ZBTB24O43167 697 aaPredicted RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 TIMM44O43615 452 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 PAGE1O75459 146 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 LUC7L3O95232 432 aaKnown RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 ADCY5O95622 1261 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 F9P00740 461 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 KRT3P12035 628 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 SKILP12757 684 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 PDGFRAP16234 1089 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 PRKCHP24723 683 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 SDC4P31431 198 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 NUMBP49757 651 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 IRX4P78413 519 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 LMAN2Q12907 356 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF234Q14588 700 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 EIF4HQ15056 248 aaKnown RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 C15orf59Q2T9L4 293 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms