RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CCNJLQ8IV13 435 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 THEM5Q8N1Q8 247 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 DEPDC1BQ8WUY9 529 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 EPAS1Q99814 870 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 GORASP1Q9BQQ3 440 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 KLHL8Q9P2G9 620 aaPredicted RBP20.24■□□□□ 0.83
MBD3-209ENST00000592012 CHKBQ9Y259 395 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 PLLPQ9Y342 182 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 TTC3P53804 2025 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 ZNF189O75820 626 aaPredicted RBP20.24■□□□□ 0.83
MBD3-209ENST00000592012 CCNFP41002 786 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 EIF4EBP2Q13542 120 aaPredicted RBP20.24■□□□□ 0.83
MBD3-209ENST00000592012 MROH9Q5TGP6 573 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 RTN4RL1Q86UN2 441 aaPredicted RBP20.24■□□□□ 0.83
MBD3-209ENST00000592012 DQX1Q8TE96 717 aaKnown RBP20.24■□□□□ 0.83
MBD3-209ENST00000592012 BRD8Q9H0E9 1235 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 NLRC5Q86WI3 1866 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 IGLV3-25P01717 112 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 PGAM1P18669 254 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 EPHB2P29323 1055 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 SERPINB4P48594 390 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 SERPINB9P50453 376 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 PLEKHG4Q58EX7 1191 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 BEND5Q7L4P6 421 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 HDAC11Q96DB2 347 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 NAT9Q9BTE0 207 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 IQCGQ9H095 443 aaKnown RBP20.23■□□□□ 0.83
MBD3-209ENST00000592012 CFAP73A6NFT4 308 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 TYMPP19971 482 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 MX2P20592 715 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 ACLYP53396 1101 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 TSPY1Q01534 308 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 NIPAL4Q0D2K0 466 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 GALNT2Q10471 571 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 LRRC37BQ96QE4 947 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 SLC13A1Q9BZW2 595 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 MYLK2Q9H1R3 596 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 MKS1Q9NXB0 559 aa20.23■□□□□ 0.83
MBD3-209ENST00000592012 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 B4GALT3O60512 393 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 ALDH3A1P30838 453 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 GARSP41250 739 aaKnown RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 CRYMQ14894 314 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 FYB2Q5VWT5 728 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 TIFABQ6ZNK6 161 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 PAXIP1Q6ZW49 1069 aaPredicted RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 RNF180Q86T96 592 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 TBC1D1Q86TI0 1168 aaPredicted RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 HHIPL1Q96JK4 782 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 NPHS2Q9NP85 383 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 RGS18Q9NS28 235 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 SYBUQ9NX95 663 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 SHROOM3Q8TF72 1996 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 ZBTB24O43167 697 aaPredicted RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 CABYRO75952 493 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 CKBP12277 381 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 CD68P34810 354 aaPredicted RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 ELF3P78545 371 aaPredicted RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 OLIG2Q13516 323 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 SETDB1Q15047 1291 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 MARK2Q7KZI7 788 aaKnown RBP20.22■□□□□ 0.83
MBD3-209ENST00000592012 ZNF280BQ86YH2 543 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 RNF34Q969K3 372 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 AGAP3Q96P47 875 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 TSSK1BQ9BXA7 367 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 OSBPL2Q9H1P3 480 aa20.22■□□□□ 0.83
MBD3-209ENST00000592012 ARHGEF37A1IGU5 675 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 TNFRSF10BO14763 440 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 MTSS1O43312 755 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 AP2A1O95782 977 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 CCNB1P14635 433 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 BGNP21810 368 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 CNTFP26441 200 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 SERPINB6P35237 376 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 SP3Q02447 781 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 YWHAHQ04917 246 aaPredicted RBP20.21■□□□□ 0.83
MBD3-209ENST00000592012 OVGP1Q12889 678 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 ZNF398Q8TD17 642 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 DPF3Q92784 378 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 ERP27Q96DN0 273 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 TRIM62Q9BVG3 475 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 C2CD2LO14523 706 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 MGRN1O60291 552 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 DCTN3O75935 186 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 DDHD2O94830 711 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 SKIV2L2P42285 1042 aaKnown RBP20.21■□□□□ 0.83
MBD3-209ENST00000592012 SLC5A3P53794 718 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 ZBTB17Q13105 803 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 TEX44Q53QW1 395 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 MAP3K21Q5TCX8 1036 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 TRAF7Q6Q0C0 670 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 ASRGL1Q7L266 308 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 SPATA2LQ8IUW3 424 aaPredicted RBP20.21■□□□□ 0.83
MBD3-209ENST00000592012 OR52K1Q8NGK4 314 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 ZSCAN18Q8TBC5 510 aaPredicted RBP20.21■□□□□ 0.83
MBD3-209ENST00000592012 ARHGEF38Q9NXL2 777 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 SLC17A6Q9P2U8 582 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 PCDHB8Q9UN66 801 aa20.21■□□□□ 0.83
MBD3-209ENST00000592012 THSD7BQ9C0I4 1608 aa20.2■□□□□ 0.82
MBD3-209ENST00000592012 KLF11O14901 512 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms