RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 HMGXB4Q9UGU5 601 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 HCN2Q9UL51 889 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ASPMQ8IZT6 3477 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 SLC12A8A0AV02 714 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 ANKRD33BA6NCL7 494 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 GOLGA6L3A6NEY3 463 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 METTL12A8MUP2 240 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 WASH3PC4AMC7 463 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 MDM4O15151 490 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 BCAT2O15382 392 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 EPHX1P07099 455 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 HMBSP08397 361 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 FTH1P19P0C7X4 201 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 GPC1P35052 558 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 MATKP42679 507 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 PGFP49763 221 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 TPMTP51580 245 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 AFF3P51826 1226 aaKnown RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 YWHAEP62258 255 aaKnown RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 ADAM9Q13443 819 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 ENPP2Q13822 863 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 STX1AQ16623 288 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 MPPE1Q53F39 396 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 DCAF12L1Q5VU92 463 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 FYB2Q5VWT5 728 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 MRPL14Q6P1L8 145 aaKnown RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 SERPINA13PQ6UXR4 307 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 RBM43Q6ZSC3 357 aaKnown RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 GLRX5Q86SX6 157 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 DENND1CQ8IV53 801 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 TAS1R2Q8TE23 839 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 WFIKKN2Q8TEU8 576 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 RNF139Q8WU17 664 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 SMARCE1Q969G3 411 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 TSPY26PQ9H489 355 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 KIAA1522Q9P206 1035 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 HESX1Q9UBX0 185 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 NUDT5Q9UKK9 219 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 AGO1Q9UL18 857 aaKnown RBP9.85□□□□□ -0.83
BRCA1-226ENST00000591534 MAPK8IP1Q9UQF2 711 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 PCDHGB2Q9Y5G2 931 aa9.85□□□□□ -0.83
BRCA1-226ENST00000591534 KIAA1549LQ6ZVL6 1849 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 FAM208BQ5VWN6 2430 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 NUP205Q92621 2012 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 FIGNL2A6NMB9 653 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 FLRT2O43155 660 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 GADD45BO75293 160 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 GJB3O75712 270 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 RHOBTB3O94955 611 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 LATS1O95835 1130 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ZBED1O96006 694 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 IGLV3-19P01714 112 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ATP5BP06576 529 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 EPB41P11171 864 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 RHOQP17081 205 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 MAOBP27338 520 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 IL12RB1P42701 662 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 EIF1AXP47813 144 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 MXI1P50539 228 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 YWHAGP61981 247 aaKnown RBP eCLIP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ZBTB16Q05516 673 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 PNOCQ13519 176 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ZNF234Q14588 700 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 GEN1Q17RS7 908 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 INAVAQ3KP66 663 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ZNF394Q53GI3 561 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ARHGAP17Q68EM7 881 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 SCD5Q86SK9 330 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 PROSER1Q86XN7 944 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 CCDC117Q8IWD4 279 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 SMYD4Q8IYR2 804 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 GUF1Q8N442 669 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ZCCHC9Q8N567 271 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 MLKLQ8NB16 471 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ANKRD52Q8NB46 1076 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 FBXL13Q8NEE6 735 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 OR2I1PQ8NGU4 316 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 OR2T3Q8NH03 318 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 GOLGA1Q92805 767 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 SKA1Q96BD8 255 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 ERLEC1Q96DZ1 483 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 MYO19Q96H55 970 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 PIWIL1Q96J94 861 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 TWNKQ96RR1 684 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 MKRN2Q9H000 416 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 SLC6A17Q9H1V8 727 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 GAREM1Q9H706 876 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 MMRN2Q9H8L6 949 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 LRRC4Q9HBW1 653 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 APOBEC3GQ9HC16 384 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 TM7SF3Q9NS93 570 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 CISHQ9NSE2 258 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 DCTN4Q9UJW0 460 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 RALYQ9UKM9 306 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 KIAA1257Q9ULG3 409 aa9.84□□□□□ -0.83
BRCA1-226ENST00000591534 HBS1LQ9Y450 684 aaKnown RBP9.84□□□□□ -0.83
BRCA1-226ENST00000591534 TYW5A2RUC4 315 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms