RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ACAD10Q6JQN1 1059 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 KIAA1211LQ6NV74 962 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 FBXL22Q6P050 247 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 MON1BQ7L1V2 547 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 BNIPLQ7Z465 357 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 KBTBD6Q86V97 674 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 CIR1Q86X95 450 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 CCDC117Q8IWD4 279 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 AHI1Q8N157 1196 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 PGBD3Q8N328 593 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 DCLK2Q8N568 766 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 FAM160A2Q8N612 972 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 EMC1Q8N766 993 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 OLIG1Q8TAK6 271 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 CYB5D2Q8WUJ1 264 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 RXFP2Q8WXD0 754 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ERLEC1Q96DZ1 483 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 LMLNQ96KR4 655 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 NUP58Q9BVL2 599 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 TKTL2Q9H0I9 626 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 SIK2Q9H0K1 926 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 HAUS4Q9H6D7 363 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ANLNQ9NQW6 1124 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ARHGEF38Q9NXL2 777 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 PLA2G4CQ9UP65 541 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 INVSQ9Y283 1065 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 RAD54BQ9Y620 910 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 HS3ST4Q9Y661 456 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 EML5Q05BV3 1969 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 A0A1B0GVM2 712 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 A0A1W2PQJ5 194 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 TCAF2A6NFQ2 919 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 C2CD4BA6NLJ0 364 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 SIGLEC16A6NMB1 481 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 I6L893 689 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 SYNCRIPO60506 623 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 ENDOD1O94919 500 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 LUC7L3O95232 432 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 GJB6O95452 261 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 RETP07949 1114 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 DLDP09622 509 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 POLR2EP19388 210 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 SDC4P31431 198 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 RDXP35241 583 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 RFC1P35251 1148 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 GGCXP38435 758 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 PRKCIP41743 596 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 ATP11AP98196 1134 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 KLHL30Q0D2K2 578 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 STARD3Q14849 445 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 C15orf59Q2T9L4 293 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 FUT11Q495W5 492 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 CCDC14Q49A88 953 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 FNDC3BQ53EP0 1204 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 SERPINA13PQ6UXR4 307 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 ZNF571Q7Z3V5 609 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 C14orf80Q86SX3 495 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 FAM131BQ86XD5 332 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 MCOLN2Q8IZK6 566 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 CCAR2Q8N163 923 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 C3orf20Q8ND61 904 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 JOSD2Q8TAC2 188 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 RLN3Q8WXF3 142 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 IGSF8Q969P0 613 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 VCPIP1Q96JH7 1222 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 ZC3H10Q96K80 434 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 RPRD1AQ96P16 312 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 SELENOOQ9BVL4 669 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 TAS2R14Q9NYV8 317 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 KIAA1522Q9P206 1035 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 GMEB2Q9UKD1 530 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 INTS6Q9UL03 887 aaKnown RBP9.49□□□□□ -0.89
DNMT1-223ENST00000591239 VANGL2Q9ULK5 521 aa9.49□□□□□ -0.89
DNMT1-223ENST00000591239 SDK1Q7Z5N4 2213 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 TCRBV5S1A1TA0A578 114 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 TMCO5BA8MYB1 307 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 TPM3P06753 285 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 EPHX1P07099 455 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 SKILP12757 684 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 HLA-EP13747 358 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 NDUFV2P19404 249 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 PRKCHP24723 683 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 P2RY2P41231 377 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 CSKP41240 450 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 PTPN9P43378 593 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 IRAK1P51617 712 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 ZBED6P86452 979 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 SLC12A1Q13621 1099 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
DNMT1-223ENST00000591239 ELF2Q15723 593 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 PTPRNQ16849 979 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 CDO1Q16878 200 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 PLK5Q496M5 336 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 C5orf22Q49AR2 442 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 RAB6CQ53S08 254 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 ACBD5Q5T8D3 534 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-223ENST00000591239 PPP1R2P3Q6NXS1 205 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 DNAJC24Q6P3W2 148 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms