RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 KIAA1324Q6UXG2 1013 aaKnown RBP18.65■□□□□ 0.58
VAT1-208ENST00000590924 SIX6OS1Q8N1H7 587 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 DEFB124Q8NES8 71 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 DDI1Q8WTU0 396 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 RNF139Q8WU17 664 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 SLC20A1Q8WUM9 679 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 MKRN2Q9H000 416 aaKnown RBP18.65■□□□□ 0.58
VAT1-208ENST00000590924 MIS12Q9H081 205 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 PRDM16Q9HAZ2 1276 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 ELOVL2Q9NXB9 296 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 USP36Q9P275 1121 aaKnown RBP18.65■□□□□ 0.58
VAT1-208ENST00000590924 STOML2Q9UJZ1 356 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 CLEC4EQ9ULY5 219 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 WASF3Q9UPY6 502 aa18.65■□□□□ 0.58
VAT1-208ENST00000590924 FRYQ5TBA9 3013 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 YJEFN3A6XGL0 299 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 AKR1B15C9JRZ8 316 aaPredicted RBP18.64■□□□□ 0.57
VAT1-208ENST00000590924 E7ENQ6 273 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 LATS1O95835 1130 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 HOXD9P28356 352 aaPredicted RBP18.64■□□□□ 0.57
VAT1-208ENST00000590924 CD6P30203 668 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 ATXN3P54252 364 aaPredicted RBP18.64■□□□□ 0.57
VAT1-208ENST00000590924 DAOAP59103 153 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 PDCLQ13371 301 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 ZNF234Q14588 700 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 MPPE1Q53F39 396 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 MSANTD4Q8NCY6 345 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 IRGQQ8WZA9 623 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 FOXJ1Q92949 421 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 PPP1R13BQ96KQ4 1090 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 SLC32A1Q9H598 525 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 HAUS4Q9H6D7 363 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 GRPEL1Q9HAV7 217 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 FSCN3Q9NQT6 498 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 ABCC13Q9NSE7 274 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 ZNHIT6Q9NWK9 470 aaKnown RBP18.64■□□□□ 0.57
VAT1-208ENST00000590924 IMPACTQ9P2X3 320 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 CYTH4Q9UIA0 394 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 KNL1Q8NG31 2342 aa18.64■□□□□ 0.57
VAT1-208ENST00000590924 SART1O43290 800 aaKnown RBP18.63■□□□□ 0.57
VAT1-208ENST00000590924 TIMM44O43615 452 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 MFAP3LO75121 409 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 GABBR2O75899 941 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 UNGP13051 313 aaPredicted RBP18.63■□□□□ 0.57
VAT1-208ENST00000590924 TNFAIP3P21580 790 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 NOMO3P69849 1222 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 FOXC1Q12948 553 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 SYCP2LQ5T4T6 812 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 E4F1Q66K89 784 aaPredicted RBP18.63■□□□□ 0.57
VAT1-208ENST00000590924 HGSNATQ68CP4 663 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 TMEM215Q68D42 235 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 MSANTD2Q6P1R3 559 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 PIP4P1Q86T03 277 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 PASD1Q8IV76 773 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 HDDC3Q8N4P3 179 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 EDEM1Q92611 657 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 CIPCQ9C0C6 399 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 ST7Q9NRC1 585 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 SUSD2Q9UGT4 822 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 SFMBT1Q9UHJ3 866 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 CABIN1Q9Y6J0 2220 aa18.63■□□□□ 0.57
VAT1-208ENST00000590924 ARHGAP33O14559 1287 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 SYNCRIPO60506 623 aaKnown RBP18.62■□□□□ 0.57
VAT1-208ENST00000590924 IGLV3-19P01714 112 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 SYPP08247 313 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 GZMAP12544 262 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 NCAM1P13591 858 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 GABRB2P47870 512 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 RGS7P49802 495 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 CDK17Q00537 523 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 ADGRF1Q5T601 910 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 VPS36Q86VN1 386 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 ERICH1Q86X53 443 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 TMPRSS6Q8IU80 811 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 ZDHHC17Q8IUH5 632 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 RGL4Q8IZJ4 473 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 MINDY1Q8N5J2 469 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 C1orf131Q8NDD1 294 aaKnown RBP18.62■□□□□ 0.57
VAT1-208ENST00000590924 GTPBP2Q9BX10 602 aaKnown RBP18.62■□□□□ 0.57
VAT1-208ENST00000590924 ITM2CQ9NQX7 267 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 ABHD10Q9NUJ1 306 aa18.62■□□□□ 0.57
VAT1-208ENST00000590924 WSB2Q9NYS7 404 aaPredicted RBP18.62■□□□□ 0.57
VAT1-208ENST00000590924 MSI1O43347 362 aaKnown RBP18.61■□□□□ 0.57
VAT1-208ENST00000590924 OPHN1O60890 802 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 IGLV3-27P01718 113 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 SKILP12757 684 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 LCP1P13796 627 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 PRKCHP24723 683 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 HLA-FP30511 346 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 COPAP53621 1224 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 ADKP55263 362 aaKnown RBP18.61■□□□□ 0.57
VAT1-208ENST00000590924 CENPCQ03188 943 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 CLEC16AQ2KHT3 1053 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 WDR45BQ5MNZ6 344 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 SERPINA13PQ6UXR4 307 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 BEND5Q7L4P6 421 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 ZNF571Q7Z3V5 609 aaPredicted RBP18.61■□□□□ 0.57
VAT1-208ENST00000590924 CADM4Q8NFZ8 388 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 WFIKKN2Q8TEU8 576 aa18.61■□□□□ 0.57
VAT1-208ENST00000590924 DNASE2BQ8WZ79 361 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms