RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 DGKEP52429 567 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 NOMO3P69849 1222 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 UBXN1Q04323 297 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 TAF3Q5VWG9 929 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 EGFLAMQ63HQ2 1017 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 SLC26A9Q7LBE3 791 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 UNC45BQ8IWX7 931 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 DEFB106AQ8N104 65 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 ZNF513Q8N8E2 541 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-211ENST00000590499 TMEM35BQ8NCS4 154 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-211ENST00000590499 TSTD1Q8NFU3 115 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 RNF217Q8TC41 542 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 SLC20A1Q8WUM9 679 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 GAB3Q8WWW8 586 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 RUBCNQ92622 972 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 SLC2A11Q9BYW1 496 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 CD248Q9HCU0 757 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 NLRC4Q9NPP4 1024 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 CEP83Q9Y592 693 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 GOLGA6L7A0A1B0GV03 622 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 SYCE3A1L190 88 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 MSTNO14793 375 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 CAPN9O14815 690 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 TEX33O43247 280 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 DAB1O75553 588 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 GFPT2O94808 682 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 MMEP08473 750 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 CHRNB2P17787 502 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 SCNN1AP37088 669 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 SLC11A2P49281 568 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 FMO1Q01740 532 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 SLC6A3Q01959 620 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 GEN1Q17RS7 908 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 MPPE1Q53F39 396 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 EFHC1Q5JVL4 640 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 EOGTQ5NDL2 527 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 MPP7Q5T2T1 576 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 PIK3R6Q5UE93 754 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 OTUD1Q5VV17 481 aaPredicted RBP11.63□□□□□ -0.55
SMAD4-211ENST00000590499 OR6B2Q6IFH4 312 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 RFWD3Q6PCD5 774 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 TRMT11Q7Z4G4 463 aaKnown RBP11.63□□□□□ -0.55
SMAD4-211ENST00000590499 ZNF677Q86XU0 584 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 ZDHHC17Q8IUH5 632 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 MDGA1Q8NFP4 955 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 IPO4Q8TEX9 1081 aaKnown RBP11.63□□□□□ -0.55
SMAD4-211ENST00000590499 DDI1Q8WTU0 396 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 MYEOVQ96EZ4 313 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 PRICKLE1Q96MT3 831 aaPredicted RBP11.63□□□□□ -0.55
SMAD4-211ENST00000590499 ACOX2Q99424 681 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 GABRG3Q99928 467 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 XPO7Q9UIA9 1087 aaKnown RBP11.63□□□□□ -0.55
SMAD4-211ENST00000590499 GON4LQ3T8J9 2241 aa11.63□□□□□ -0.55
SMAD4-211ENST00000590499 THADAQ6YHU6 1953 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 A0A1W2PQF6 199 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 SMTNL1A8MU46 457 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 KCNU1A8MYU2 1149 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 TSPAN3O60637 253 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 GRAP2O75791 330 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 RPP40O75818 363 aaKnown RBP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 CYP1A1P04798 512 aaPredicted RBP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 ITGB2P05107 769 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 PTMSP20962 102 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 HLA-FP30511 346 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 NTSR1P30989 418 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 STAT1P42224 750 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 SNX16P57768 344 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 CDR2Q01850 454 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 ENPP2Q13822 863 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 SIM2Q14190 667 aaPredicted RBP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 PLA2G4EQ3MJ16 856 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 DCAF6Q58WW2 860 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 ZC3H12AQ5D1E8 599 aaKnown RBP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 TMEM215Q68D42 235 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 LAIR1Q6GTX8 287 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 ANO7Q6IWH7 933 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 ANKS1BQ7Z6G8 1248 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 KIAA0907Q7Z7F0 614 aaPredicted RBP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 XYLT1Q86Y38 959 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 DCLK2Q8N568 766 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 NEK11Q8NG66 645 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 OLIG1Q8TAK6 271 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 WFDC5Q8TCV5 224 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 C18orf8Q96DM3 657 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 TMA16Q96EY4 203 aaKnown RBP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 LMLNQ96KR4 655 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 SPAG5Q96R06 1193 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 NUCKS1Q9H1E3 243 aaKnown RBP11.62□□□□□ -0.55
SMAD4-211ENST00000590499 CALCOCO1Q9P1Z2 691 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 NUP205Q92621 2012 aa11.62□□□□□ -0.55
SMAD4-211ENST00000590499 A0A1B0GTH6 734 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 HOXB2P14652 356 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 TGM1P22735 817 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 MATKP42679 507 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 CDK17Q00537 523 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 EIF4HQ15056 248 aaKnown RBP11.61□□□□□ -0.55
SMAD4-211ENST00000590499 LPAL2Q16609 132 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms