RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PDGFDQ9GZP0 370 aaPredicted RBP12.7□□□□□ -0.38
PDE4A-207ENST00000590407 CDH19Q9H159 772 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
PDE4A-207ENST00000590407 PNPOQ9NVS9 261 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 NDUFA13Q9P0J0 144 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 TMEM216Q9P0N5 145 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 VPS28Q9UK41 221 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 ARHGAP26Q9UNA1 814 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 POMPQ9Y244 141 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 NME7Q9Y5B8 376 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 GJA3Q9Y6H8 435 aa12.7□□□□□ -0.38
PDE4A-207ENST00000590407 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 UBTFL6P0CB48 400 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 TXNP10599 105 aaKnown RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 DNAJB1P25685 340 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 TYK2P29597 1187 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SPRP35270 261 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 HADHAP40939 763 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 MATKP42679 507 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 LIMK2P53671 638 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 MED21Q13503 144 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 LAMC2Q13753 1193 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SOWAHAQ2M3V2 549 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SLC25A52Q3SY17 297 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 CASC4Q6P4E1 433 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 CLEC14AQ86T13 490 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 LCA5Q86VQ0 697 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 RASSF3Q86WH2 238 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 UNC5BQ8IZJ1 945 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 CCDC185Q8N715 623 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SREK1Q8WXA9 508 aaKnown RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 NT5C3BQ969T7 300 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 P2RY11Q96G91 374 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 MMP19Q99542 508 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 RBBP8Q99708 897 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SPATA16Q9BXB7 569 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 B3GNT5Q9BYG0 378 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 LRRC40Q9H9A6 602 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 CPSF2Q9P2I0 782 aaKnown RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 TXNDC16Q9P2K2 825 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 PSAT1Q9Y617 370 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 ERI2A8K979 691 aaKnown RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 MFSD11O43934 449 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 PEX10O60683 326 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 RNASEH1O60930 286 aaKnown RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 USP1O94782 785 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 LGALS2P05162 132 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 APOA4P06727 396 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 COX4I1P13073 169 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 GOT1P17174 413 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 GLDCP23378 1020 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 ARRB2P32121 409 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 CSE1LP55060 971 aaKnown RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 ARHGAP1Q07960 439 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 MSLNQ13421 630 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 RALGPS1Q5JS13 557 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 ATG14Q6ZNE5 492 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 EP400NLQ6ZTU2 488 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 LIMS2Q7Z4I7 341 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 TMEM135Q86UB9 458 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 FBXO16Q8IX29 292 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 BEST2Q8NFU1 509 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 RDH11Q8TC12 318 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 TRPM4Q8TD43 1214 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 EMID1Q96A84 441 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SNX27Q96L92 541 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 HAPLN3Q96S86 360 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 TSPAN18Q96SJ8 248 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 LBHD1Q9BQE6 289 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 EBF3Q9H4W6 596 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 FAM49BQ9NUQ9 324 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SYBUQ9NX95 663 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 C6orf203Q9P0P8 240 aaPredicted RBP12.69□□□□□ -0.38
PDE4A-207ENST00000590407 ADAMTS6Q9UKP5 1117 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
PDE4A-207ENST00000590407 ASB14A6NK59 587 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 H3BNX3 289 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 DAB1O75553 588 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
PDE4A-207ENST00000590407 CSRP3P50461 194 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 AIF1P55008 147 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 SESN2P58004 480 aaPredicted RBP12.68□□□□□ -0.38
PDE4A-207ENST00000590407 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
PDE4A-207ENST00000590407 KLF10Q13118 480 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 ITGA9Q13797 1035 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 DPYSQ14117 519 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 KCTD2Q14681 263 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 SFT2D3Q587I9 215 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 SETD3Q86TU7 594 aaPredicted RBP12.68□□□□□ -0.38
PDE4A-207ENST00000590407 DEFB107AQ8IZN7 70 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 SLC25A41Q8N5S1 370 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 POU5F2Q8N7G0 328 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 GDPD5Q8WTR4 605 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 RNF139Q8WU17 664 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 LRRN4Q8WUT4 740 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 PYDC1Q8WXC3 89 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms