RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 KLF11O14901 512 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 PSTPIP1O43586 416 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 CHEK2O96017 543 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 HDCP19113 662 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 SHMT1P34896 483 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 CLCQ05315 142 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 ZNF252P-AS1Q0IIN9 211 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 RAB39AQ14964 217 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 USP43Q70EL4 1123 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 SPNS2Q8IVW8 549 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 MPP5Q8N3R9 675 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 PDZD8Q8NEN9 1154 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 ADCY4Q8NFM4 1077 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 CYGBQ8WWM9 190 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 FAF2Q96CS3 445 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 RAB6BQ9NRW1 208 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 ARHGEF35A5YM69 484 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 IPO5O00410 1097 aaKnown RBP15.56■□□□□ 0.08
CIRBP-228ENST00000590347 SULT1C4O75897 302 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 HOXA7P31268 230 aaPredicted RBP15.56■□□□□ 0.08
CIRBP-228ENST00000590347 PLCL1Q15111 1095 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 TMEM102Q8N9M5 508 aaPredicted RBP15.56■□□□□ 0.08
CIRBP-228ENST00000590347 FBXL20Q96IG2 436 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 CALN1Q9BXU9 219 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 RNF38Q9H0F5 515 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 MIR1-1HGQ9H1L0 117 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 HIPK3Q9H422 1215 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 CLK4Q9HAZ1 481 aaKnown RBP15.56■□□□□ 0.08
CIRBP-228ENST00000590347 FIS1Q9Y3D6 152 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 PCDHGA8Q9Y5G5 932 aa15.56■□□□□ 0.08
CIRBP-228ENST00000590347 PFDN6O15212 129 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 ERBB2P04626 1255 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 FGF3P11487 239 aaPredicted RBP15.55■□□□□ 0.08
CIRBP-228ENST00000590347 IDUAP35475 653 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 TCF7P36402 384 aaPredicted RBP15.55■□□□□ 0.08
CIRBP-228ENST00000590347 BFSP2Q13515 415 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 TBCCQ15814 346 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 KIAA2013Q8IYS2 634 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 RPL10LQ96L21 214 aaKnown RBP15.55■□□□□ 0.08
CIRBP-228ENST00000590347 FRMD8Q9BZ67 464 aaPredicted RBP15.55■□□□□ 0.08
CIRBP-228ENST00000590347 DNAJC28Q9NX36 388 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 MAGED2Q9UNF1 606 aaPredicted RBP15.55■□□□□ 0.08
CIRBP-228ENST00000590347 UBR3Q6ZT12 1888 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 TCP10L2B9ZVM9 353 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 AP3B1O00203 1094 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 APRTP07741 180 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 ENO2P09104 434 aaPredicted RBP15.55■□□□□ 0.08
CIRBP-228ENST00000590347 FPGSQ05932 587 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 MMRN1Q13201 1228 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 SNRNP35Q16560 246 aaKnown RBP15.55■□□□□ 0.08
CIRBP-228ENST00000590347 USP37Q86T82 979 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 ANKRD36BP1Q96IX9 119 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 TTLL3Q9Y4R7 772 aa15.55■□□□□ 0.08
CIRBP-228ENST00000590347 SOCS2O14508 198 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 GRIA1P42261 906 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 Q3C1V9 767 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ASPRV1Q53RT3 343 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 LIN9Q5TKA1 542 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 SV2AQ7L0J3 742 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 MON1BQ7L1V2 547 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 UBR7Q8N806 425 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 FAR2Q96K12 515 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 PRELID1Q9Y255 219 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 TNPO2O14787 897 aaKnown RBP15.54■□□□□ 0.08
CIRBP-228ENST00000590347 MYCLP1P12525 358 aaPredicted RBP15.54■□□□□ 0.08
CIRBP-228ENST00000590347 L1CAMP32004 1257 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 TFDP3Q5H9I0 405 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 UBE2UQ5VVX9 321 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 MBLAC2Q68D91 279 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 RFX6Q8HWS3 928 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 LARGE2Q8N3Y3 721 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 EMC1Q8N766 993 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 SORT1Q99523 831 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 HGH1Q9BTY7 390 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 SNX25Q9H3E2 840 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 TJP2Q9UDY2 1190 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ERGIC3Q9Y282 383 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ASTN2O75129 1339 aaPredicted RBP15.54■□□□□ 0.08
CIRBP-228ENST00000590347 MAN1A2O60476 641 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 HLA-DOAP06340 250 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 RFX1P22670 979 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 EEF1B2P24534 225 aaKnown RBP15.54■□□□□ 0.08
CIRBP-228ENST00000590347 GRK2P25098 689 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 PIK3R1P27986 724 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 CDKN2BP42772 138 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ACADVLP49748 655 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ARL13BQ3SXY8 428 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ZBED5Q49AG3 693 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 IL31Q6EBC2 164 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ZBTB49Q6ZSB9 765 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 C10orf71Q711Q0 1435 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 RCOR2Q8IZ40 523 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 UNKQ9C0B0 810 aaKnown RBP15.54■□□□□ 0.08
CIRBP-228ENST00000590347 MUC3BQ9H195 1237 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 TXNDC16Q9P2K2 825 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 PI4KBQ9UBF8 816 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 ATP11BQ9Y2G3 1177 aa15.54■□□□□ 0.08
CIRBP-228ENST00000590347 BRWD3Q6RI45 1802 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 KRT75O95678 551 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 OPRL1P41146 370 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms