RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 RPRD1AQ96P16 312 aaPredicted RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 PCDHB18PQ96TA0 734 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 TBCBQ99426 244 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 AGPAT1Q99943 283 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 C11orf70Q9BRQ4 267 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 FUCA2Q9BTY2 467 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 TKTL2Q9H0I9 626 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 SMOC1Q9H4F8 434 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 ADAM22Q9P0K1 906 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 SUN2Q9UH99 717 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 MBD1Q9UIS9 605 aaPredicted RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 BCLAF3A2AJT9 711 aaKnown RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 FOXD2O60548 495 aaPredicted RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 NDUFS2O75306 463 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 PAGE1O75459 146 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 ADCY5O95622 1261 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 ZNF806P0C7X5 589 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 FERP16591 822 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 TNFAIP3P21580 790 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 SDHBP21912 280 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 MMP8P22894 467 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 FLT3P36888 993 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 GGCXP38435 758 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 MPLP40238 635 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 CSKP41240 450 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 NSFP46459 744 aaKnown RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 CXCR3P49682 368 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 ENPP2Q13822 863 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 SKOR2Q2VWA4 1001 aaPredicted RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 SLC25A52Q3SY17 297 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 FBXL22Q6P050 247 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 CYP2U1Q7Z449 544 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 CIR1Q86X95 450 aaPredicted RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 PRCCQ92733 491 aaPredicted RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 IGSF8Q969P0 613 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 TTC17Q96AE7 1141 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 SIPA1Q96FS4 1042 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 PRMT1Q99873 361 aaKnown RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 CBX8Q9HC52 389 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 CD248Q9HCU0 757 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 METTL5Q9NRN9 209 aaKnown RBP12.48□□□□□ -0.41
TPM4-212ENST00000590180 VPS45Q9NRW7 570 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 TMEM59LQ9UK28 342 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 VANGL2Q9ULK5 521 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 PAXBP1Q9Y5B6 917 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 HS3ST4Q9Y661 456 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 THADAQ6YHU6 1953 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
TPM4-212ENST00000590180 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 AP5Z1O43299 807 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 GDF9O60383 454 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 ACADMP11310 421 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 UNGP13051 313 aaPredicted RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 PDGFRAP16234 1089 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 PTGER3P43115 390 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 NUMBP49757 651 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 ATP11AP98196 1134 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 PUM1Q14671 1186 aaKnown RBP eCLIP12.47□□□□□ -0.41
TPM4-212ENST00000590180 PTPRNQ16849 979 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 CLEC16AQ2KHT3 1053 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 PITRM1Q5JRX3 1037 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 BRMS1LQ5PSV4 323 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 RNF43Q68DV7 783 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 LRRC31Q6UY01 552 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 LUZP1Q86V48 1076 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 CACUL1Q86Y37 369 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 APCDD1Q8J025 514 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 CCAR2Q8N163 923 aaKnown RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 EMC1Q8N766 993 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 RXFP2Q8WXD0 754 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 NT5C3BQ969T7 300 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 LMLNQ96KR4 655 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 CFAP57Q96MR6 1250 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 PPP1R9BQ96SB3 815 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 MKRN2Q9H000 416 aaKnown RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 ITM2CQ9NQX7 267 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 TMEM51Q9NW97 253 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 ARHGEF38Q9NXL2 777 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 INTS6Q9UL03 887 aaKnown RBP12.47□□□□□ -0.41
TPM4-212ENST00000590180 ERVW-1Q9UQF0 538 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 SNX10Q9Y5X0 201 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 EML5Q05BV3 1969 aa12.47□□□□□ -0.41
TPM4-212ENST00000590180 A0A1B0GTH6 734 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 KHNYNO15037 678 aaKnown RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 GJB6O95452 261 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 ASLP04424 464 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 CALB1P05937 261 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 KRT3P12035 628 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms