RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PRRT4C9JH25 899 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 TMEM253P0C7T8 217 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 PABPC1P11940 636 aaKnown RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 CYLC1P35663 651 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 KIR2DL1P43626 348 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 CXCL12P48061 93 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 AIF1P55008 147 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 ANGPT1Q15389 498 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 GEN1Q17RS7 908 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 HSF5Q4G112 596 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 EFHC2Q5JST6 749 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 PKN3Q6P5Z2 889 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 TRMT11Q7Z4G4 463 aaKnown RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 CIR1Q86X95 450 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 TMTC1Q8IUR5 882 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 AHI1Q8N157 1196 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 CCAR2Q8N163 923 aaKnown RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 ZNF513Q8N8E2 541 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 ZNF564Q8TBZ8 553 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-212ENST00000590096 WFDC5Q8TCV5 224 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 UVRAGQ9P2Y5 699 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 ANAPC7Q9UJX3 599 aa21.98■■□□□ 1.11
ATG4D-212ENST00000590096 CACNA1IQ9P0X4 2223 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 E9PAM4 449 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 SRGAP2O75044 1071 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 ZNF252P-AS1Q0IIN9 211 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 ACAP1Q15027 740 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 EIF4HQ15056 248 aaKnown RBP21.97■■□□□ 1.11
ATG4D-212ENST00000590096 E2F5Q15329 346 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 C5orf22Q49AR2 442 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 EMC10Q5UCC4 262 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 CHST9Q7L1S5 443 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 ALLCQ8N6M5 410 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 OSBPL2Q9H1P3 480 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 KIAA1522Q9P206 1035 aaPredicted RBP21.97■■□□□ 1.11
ATG4D-212ENST00000590096 OR12D3Q9UGF7 316 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 IP6K2Q9UHH9 426 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 SLC8A2Q9UPR5 921 aa21.97■■□□□ 1.11
ATG4D-212ENST00000590096 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-212ENST00000590096 MYO1FO00160 1098 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 TIMM44O43615 452 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 CLDN11O75508 207 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 KLF8O95600 359 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-212ENST00000590096 CD70P32970 193 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 CDH4P55283 916 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 OXCT1P55809 520 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 SATB1Q01826 763 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 NRG1Q02297 640 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-212ENST00000590096 SCAPQ12770 1279 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 LMAN2Q12907 356 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 ZNF177Q13360 481 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-212ENST00000590096 PIGHQ14442 188 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-212ENST00000590096 SPA17Q15506 151 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 CCDC33Q8N5R6 958 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 IL17RCQ8NAC3 791 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 PRSS33Q8NF86 280 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 CIPCQ9C0C6 399 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 GRPEL1Q9HAV7 217 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 LUC7LQ9NQ29 371 aaKnown RBP21.96■■□□□ 1.11
ATG4D-212ENST00000590096 PRMT8Q9NR22 394 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-212ENST00000590096 ELOVL2Q9NXB9 296 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 FBXO4Q9UKT5 387 aa21.96■■□□□ 1.11
ATG4D-212ENST00000590096 ANTXRLA6NF34 631 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 DRGXA6NNA5 263 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 PRPSAP2O60256 369 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 IPO7O95373 1038 aaKnown RBP21.95■■□□□ 1.1
ATG4D-212ENST00000590096 MOCS3O95396 460 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 FECHP22830 423 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 CSTF1Q05048 431 aaKnown RBP21.95■■□□□ 1.1
ATG4D-212ENST00000590096 EOGTQ5NDL2 527 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 EGFLAMQ63HQ2 1017 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 SDE2Q6IQ49 451 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 SYT13Q7L8C5 426 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 ZNF683Q8IZ20 524 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 TXNDC5Q8NBS9 432 aaKnown RBP21.95■■□□□ 1.1
ATG4D-212ENST00000590096 BTBD6Q96KE9 485 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 IRF2BPLQ9H1B7 796 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 ZDHHC4Q9NPG8 344 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 PCSK1NQ9UHG2 260 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 LCMT1Q9UIC8 334 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 INTUQ9ULD6 942 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 FZD10Q9ULW2 581 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 MMP17Q9ULZ9 603 aa21.95■■□□□ 1.1
ATG4D-212ENST00000590096 MYO18AQ92614 2054 aaKnown RBP21.94■■□□□ 1.1
ATG4D-212ENST00000590096 IGLV3-10A0A075B6K4 115 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 NPC1O15118 1278 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 LRCH4O75427 683 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 CNTN5O94779 1100 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 PAPSS2O95340 614 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-212ENST00000590096 POLR2EP19388 210 aaKnown RBP21.94■■□□□ 1.1
ATG4D-212ENST00000590096 MIPP30301 263 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 MAGEA1P43355 309 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 IRAK1P51617 712 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 PTPN5P54829 565 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 DMC1Q14565 340 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 FSCBQ5H9T9 825 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 MBLAC2Q68D91 279 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 KIAA0907Q7Z7F0 614 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-212ENST00000590096 CHPFQ8IZ52 775 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms