RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CHCHD4Q8N4Q1 142 aa18.66■□□□□ 0.58
H3F3B-209ENST00000589949 CPXM1Q96SM3 734 aa18.66■□□□□ 0.58
H3F3B-209ENST00000589949 ORAI3Q9BRQ5 295 aa18.66■□□□□ 0.58
H3F3B-209ENST00000589949 RSPH9Q9H1X1 276 aaPredicted RBP18.66■□□□□ 0.58
H3F3B-209ENST00000589949 SIX2Q9NPC8 291 aa18.66■□□□□ 0.58
H3F3B-209ENST00000589949 SERGEFQ9UGK8 458 aa18.66■□□□□ 0.58
H3F3B-209ENST00000589949 FNDC3AQ9Y2H6 1198 aaKnown RBP18.66■□□□□ 0.58
H3F3B-209ENST00000589949 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.66■□□□□ 0.58
H3F3B-209ENST00000589949 CHD6Q8TD26 2715 aa18.66■□□□□ 0.58
H3F3B-209ENST00000589949 WDFY3Q8IZQ1 3526 aa18.66■□□□□ 0.58
H3F3B-209ENST00000589949 DMXL2Q8TDJ6 3036 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 TTC34A8MYJ7 566 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 CBFA2T3O75081 653 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 SIN3BO75182 1162 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 TRUB2O95900 331 aaKnown RBP18.65■□□□□ 0.58
H3F3B-209ENST00000589949 PON1P27169 355 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 YWHAZP63104 245 aaKnown RBP18.65■□□□□ 0.58
H3F3B-209ENST00000589949 PITRM1Q5JRX3 1037 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 KCNT1Q5JUK3 1230 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 DPY19L2P1Q6NXN4 242 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 LAYNQ6UX15 382 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 NAXDQ8IW45 347 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 APCDD1Q8J025 514 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 KDF1Q8NAX2 398 aaPredicted RBP18.65■□□□□ 0.58
H3F3B-209ENST00000589949 SHC3Q92529 594 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 SNX19Q92543 992 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 BIRC7Q96CA5 298 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 PRMT1Q99873 361 aaKnown RBP18.65■□□□□ 0.58
H3F3B-209ENST00000589949 ZDHHC5Q9C0B5 715 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 POPDC2Q9HBU9 364 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 SLCO3A1Q9UIG8 710 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 RALYQ9UKM9 306 aaKnown RBP18.65■□□□□ 0.58
H3F3B-209ENST00000589949 ZMIZ1Q9ULJ6 1067 aa18.65■□□□□ 0.58
H3F3B-209ENST00000589949 SART1O43290 800 aaKnown RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 MED7O43513 233 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 LUC7L3O95232 432 aaKnown RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 SEMA4FO95754 770 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 PNMA6AP0CW24 399 aaPredicted RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 TACR2P21452 398 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 USP8P40818 1118 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 TRIP6Q15654 476 aaKnown RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 HLA-BQ31612 363 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 HNRNPA1L2Q32P51 320 aaKnown RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 C9orf64Q5T6V5 341 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 ENOSF1Q7L5Y1 443 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 CIR1Q86X95 450 aaPredicted RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 PASD1Q8IV76 773 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 DHX40Q8IX18 779 aaKnown RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 DDX50Q9BQ39 737 aaKnown RBP18.64■□□□□ 0.57
H3F3B-209ENST00000589949 PCED1AQ9H1Q7 454 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 THAP9Q9H5L6 903 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 GAREM1Q9H706 876 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 APEX2Q9UBZ4 518 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 SUN2Q9UH99 717 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 ERVW-1Q9UQF0 538 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 NEUROG3Q9Y4Z2 214 aa18.64■□□□□ 0.57
H3F3B-209ENST00000589949 KNL1Q8NG31 2342 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 KCNU1A8MYU2 1149 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 CAPN9O14815 690 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 GRAP2O75791 330 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 FGFR1OPO95684 399 aaKnown RBP18.63■□□□□ 0.57
H3F3B-209ENST00000589949 IGHV4-34P06331 123 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 IRAK1P51617 712 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 UBE2HP62256 183 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 ZBTB16Q05516 673 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 CDH18Q13634 790 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 KIF19Q2TAC6 998 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 ZNF776Q68DI1 518 aaPredicted RBP18.63■□□□□ 0.57
H3F3B-209ENST00000589949 GBP6Q6ZN66 633 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 RAB44Q7Z6P3 723 aaPredicted RBP18.63■□□□□ 0.57
H3F3B-209ENST00000589949 DEFB106AQ8N104 65 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 PNPLA1Q8N8W4 532 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 RPL10LQ96L21 214 aaKnown RBP18.63■□□□□ 0.57
H3F3B-209ENST00000589949 SLC2A13Q96QE2 648 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 BTBD1Q9H0C5 482 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 PABPC3Q9H361 631 aaKnown RBP18.63■□□□□ 0.57
H3F3B-209ENST00000589949 FBRSQ9HAH7 460 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 TM9SF3Q9HD45 589 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 FREM2Q5SZK8 3169 aa18.63■□□□□ 0.57
H3F3B-209ENST00000589949 C10orf142B7Z368 130 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 KCNK3O14649 394 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 FSBPO95073 299 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 DNTTP04053 509 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 VAV1P15498 845 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 STK19P49842 368 aaPredicted RBP18.62■□□□□ 0.57
H3F3B-209ENST00000589949 ARID5BQ14865 1188 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 EXOC3L4Q17RC7 722 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 SLCO6A1Q86UG4 719 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 CHSY1Q86X52 802 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 OR52K2Q8NGK3 314 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 BTN2A3PQ96KV6 586 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 FAM129BQ96TA1 746 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 EBF2Q9HAK2 575 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 TM7SF3Q9NS93 570 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 PCOLCE2Q9UKZ9 415 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 MSRB2Q9Y3D2 182 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 SNX11Q9Y5W9 270 aa18.62■□□□□ 0.57
H3F3B-209ENST00000589949 SYNJ2BP-COX16A0A087WUM0 186 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 H0Y626 953 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms