RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 HPS4Q9NQG7 708 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 CWC15Q9P013 229 aaKnown RBP15.66■□□□□ 0.1
ATG4D-211ENST00000589753 MARK1Q9P0L2 795 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 STIM2Q9P246 746 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 RCOR3Q9P2K3 495 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-211ENST00000589753 C3orf70A6NLC5 250 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-211ENST00000589753 ARNTLO00327 626 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 DAPK3O43293 454 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 TBL1XO60907 577 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 ATP1A1P05023 1023 aaKnown RBP15.65■□□□□ 0.1
ATG4D-211ENST00000589753 IL4RP24394 825 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 HOXC13P31276 330 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 IRAK1P51617 712 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 GAD2Q05329 585 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 TNK2Q07912 1038 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 NR1H3Q13133 447 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 MMRN1Q13201 1228 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 TDGQ13569 410 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 ANO4Q32M45 955 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 MPP7Q5T2T1 576 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 ARTNQ5T4W7 220 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 FYB2Q5VWT5 728 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 MFSD7Q6UXD7 560 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 VSIG1Q86XK7 387 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 BHMTQ93088 406 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 C16orf45Q96MC5 204 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-211ENST00000589753 CSPG4P5Q96PW8 444 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 BBS2Q9BXC9 721 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 CATSPERBQ9H7T0 1116 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 MPP6Q9NZW5 540 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 NEU3Q9UQ49 428 aa15.65■□□□□ 0.1
ATG4D-211ENST00000589753 A0A1B0GVM2 712 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 TCAF2A6NFQ2 919 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 ZNF487B1APH4 448 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 NEDD8-MDP1E9PL57 170 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 KCNK3O14649 394 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 FGF10O15520 208 aaPredicted RBP15.64■□□□□ 0.09
ATG4D-211ENST00000589753 CNTN5O94779 1100 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 PENKP01210 267 aaPredicted RBP15.64■□□□□ 0.09
ATG4D-211ENST00000589753 PYGMP11217 842 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 ADH5P11766 374 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 RHOQP17081 205 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 HOXD9P28356 352 aaPredicted RBP15.64■□□□□ 0.09
ATG4D-211ENST00000589753 CETN2P41208 172 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 CDKN2BP42772 138 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 CDH4P55283 916 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 COPS2P61201 443 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 ZNF211Q13398 564 aaPredicted RBP15.64■□□□□ 0.09
ATG4D-211ENST00000589753 DPYSQ14117 519 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 ITPRIPL2Q3MIP1 535 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 ALFQ53S48 1182 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 ANKRD20A8PQ5CZ79 823 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 SPOCD1Q6ZMY3 1216 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 CHST9Q7L1S5 443 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 CIR1Q86X95 450 aaPredicted RBP15.64■□□□□ 0.09
ATG4D-211ENST00000589753 CSGALNACT1Q8TDX6 532 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 NAPGQ99747 312 aaPredicted RBP15.64■□□□□ 0.09
ATG4D-211ENST00000589753 MAK16Q9BXY0 300 aaKnown RBP15.64■□□□□ 0.09
ATG4D-211ENST00000589753 RETREG1Q9H6L5 497 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 PLK2Q9NYY3 685 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 GTSE1Q9NYZ3 720 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 DNAI1Q9UI46 699 aa15.64■□□□□ 0.09
ATG4D-211ENST00000589753 C5orf42Q9H799 3197 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 CTAGE9A4FU28 777 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 OTOL1A6NHN0 477 aaPredicted RBP15.63■□□□□ 0.09
ATG4D-211ENST00000589753 HOXC11O43248 304 aaPredicted RBP15.63■□□□□ 0.09
ATG4D-211ENST00000589753 CLDN11O75508 207 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 TUBB4AP04350 444 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 TYRP14679 529 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 ERCC2P18074 760 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 AMPD1P23109 780 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 TAZQ16635 292 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 TFDP3Q5H9I0 405 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 SEL1L2Q5TEA6 688 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 DCAF12L1Q5VU92 463 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 SYT10Q6XYQ8 523 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 TFAP2DQ7Z6R9 452 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 NLRP14Q86W24 1093 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 CCDC117Q8IWD4 279 aaPredicted RBP15.63■□□□□ 0.09
ATG4D-211ENST00000589753 CARNMT1Q8N4J0 409 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 TTC8Q8TAM2 541 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 DNASE1L2Q92874 299 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 FAF2Q96CS3 445 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 P2RY11Q96G91 374 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 RNF157Q96PX1 679 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 PSMB7Q99436 277 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 CARD9Q9H257 536 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 TRPV5Q9NQA5 729 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 ARHGEF4Q9NR80 690 aa15.63■□□□□ 0.09
ATG4D-211ENST00000589753 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
ATG4D-211ENST00000589753 hCG_1818297A0A087WSY0 165 aa15.62■□□□□ 0.09
ATG4D-211ENST00000589753 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.62■□□□□ 0.09
ATG4D-211ENST00000589753 WASH4PA8MWX3 477 aa15.62■□□□□ 0.09
ATG4D-211ENST00000589753 H0Y626 953 aa15.62■□□□□ 0.09
ATG4D-211ENST00000589753 KIF2AO00139 706 aaPredicted RBP15.62■□□□□ 0.09
ATG4D-211ENST00000589753 NARSO43776 548 aaKnown RBP15.62■□□□□ 0.09
ATG4D-211ENST00000589753 LUC7L3O95232 432 aaKnown RBP15.62■□□□□ 0.09
ATG4D-211ENST00000589753 SRFP11831 508 aa15.62■□□□□ 0.09
ATG4D-211ENST00000589753 CASQ1P31415 396 aa15.62■□□□□ 0.09
ATG4D-211ENST00000589753 PFKPQ01813 784 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms