RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GUSBP11Q6P575 273 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 RBM44Q6ZP01 1051 aaKnown RBP6.37□□□□□ -1.39
VPS25-204ENST00000589577 RSRC2Q7L4I2 434 aaKnown RBP6.37□□□□□ -1.39
VPS25-204ENST00000589577 ADIPOR2Q86V24 386 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 BRSK2Q8IWQ3 736 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 AADATQ8N5Z0 425 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS25-204ENST00000589577 LINC00301Q8NCQ3 95 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 ZMIZ2Q8NF64 920 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 WDR36Q8NI36 951 aaKnown RBP6.37□□□□□ -1.39
VPS25-204ENST00000589577 SSC4DQ8WTU2 575 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 SYAP1Q96A49 352 aaPredicted RBP6.37□□□□□ -1.39
VPS25-204ENST00000589577 GRAMD1AQ96CP6 724 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 MYO19Q96H55 970 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 REEP2Q9BRK0 252 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 ABCG4Q9H172 646 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 NMUR1Q9HB89 426 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 SEL1LQ9UBV2 794 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 KCNG1Q9UIX4 513 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 NUDT5Q9UKK9 219 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 FZD4Q9ULV1 537 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 CA5BQ9Y2D0 317 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 ZDHHC9Q9Y397 364 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 CLIC4Q9Y696 253 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 MORC2Q9Y6X9 1032 aaPredicted RBP6.37□□□□□ -1.39
VPS25-204ENST00000589577 SPG11Q96JI7 2443 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 CCDC187A0A096LP49 1063 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 LRRC72A6NJI9 287 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 K7ESM1 405 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 SLC26A4O43511 780 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 TIMM44O43615 452 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 RNASEH2AO75792 299 aaKnown RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 PIAS2O75928 621 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 NEBLO76041 1014 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 BEST1O76090 585 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 MBD3O95983 291 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 RARGP13631 454 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 HOXD9P28356 352 aaPredicted RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 ATP5C1P36542 298 aaKnown RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 HARS2P49590 506 aaKnown RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 OXCT1P55809 520 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 UBE2HP62256 183 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 RBP5P82980 135 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 ZNF177Q13360 481 aaPredicted RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 ESPL1Q14674 2120 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 ZRSR1Q15695 479 aaKnown RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 CST6Q15828 149 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 CDKN3Q16667 212 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 SLC45A4Q5BKX6 768 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 PERM1Q5SV97 790 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 HYIQ5T013 277 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 CAPRIN2Q6IMN6 1127 aaKnown RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 CRTC1Q6UUV9 634 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 GPRIN1Q7Z2K8 1008 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 KIAA0907Q7Z7F0 614 aaPredicted RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 B3GNT8Q7Z7M8 397 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 C14orf80Q86SX3 495 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 FAM35AQ86V20 835 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 IQCHQ86VS3 1027 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 KCTD17Q8N5Z5 321 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 OR5B17Q8NGF7 314 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 GANCQ8TET4 914 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 GOLGA1Q92805 767 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 SAAL1Q96ER3 474 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 POM121Q96HA1 1249 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 HPDLQ96IR7 371 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 FAM213AQ9BRX8 229 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 SLC12A9Q9BXP2 914 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 SLC2A11Q9BYW1 496 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 PDE11AQ9HCR9 933 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 ZNF71Q9NQZ8 489 aaPredicted RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 NLGN3Q9NZ94 848 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 KCND2Q9NZV8 630 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 TUBD1Q9UJT1 453 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 RCOR1Q9UKL0 485 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 ODF2LQ9ULJ1 636 aa6.36□□□□□ -1.39
VPS25-204ENST00000589577 SRPRBQ9Y5M8 271 aaKnown RBP6.36□□□□□ -1.39
VPS25-204ENST00000589577 PLD2O14939 933 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 SIN3BO75182 1162 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 TACC1O75410 805 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 TCEA3O75764 348 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 PRKCGP05129 697 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 KRT7P08729 469 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 PLA2G4BP0C869 781 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 HGFP14210 728 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 SCP2P22307 547 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 GNLYP22749 145 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 CORO1AP31146 461 aaKnown RBP6.35□□□□□ -1.39
VPS25-204ENST00000589577 DRD3P35462 400 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 UGT1A5P35504 534 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 GNL1P36915 607 aaPredicted RBP6.35□□□□□ -1.39
VPS25-204ENST00000589577 STAT6P42226 847 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 TOB1P50616 345 aaPredicted RBP6.35□□□□□ -1.39
VPS25-204ENST00000589577 METAP1P53582 386 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 MLLT10P55197 1068 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 ARID5AQ03989 594 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 PDE4CQ08493 712 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 GOLGA8FQ08AF8 430 aa6.35□□□□□ -1.39
VPS25-204ENST00000589577 KCNA1Q09470 495 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms