RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 ZNF135P52742 658 aaPredicted RBP25.52■■□□□ 1.68
RFX1-205ENST00000589239 NPNTQ6UXI9 565 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 Q6ZNB5 142 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 C1orf54Q8WWF1 131 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 ATG4AQ8WYN0 398 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 MPP6Q9NZW5 540 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 SASH3O75995 380 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 IRAK1P51617 712 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 CCDC85BQ15834 202 aaPredicted RBP25.51■■□□□ 1.67
RFX1-205ENST00000589239 MAIP1Q8WWC4 291 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 IGSF8Q969P0 613 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 TBC1D31Q96DN5 1066 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 DCLK3Q9C098 648 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 LSM7Q9UK45 103 aaKnown RBP25.51■■□□□ 1.67
RFX1-205ENST00000589239 TRDMT1O14717 391 aaKnown RBP25.51■■□□□ 1.67
RFX1-205ENST00000589239 PECAM1P16284 738 aaPredicted RBP25.51■■□□□ 1.67
RFX1-205ENST00000589239 ADGRF1Q5T601 910 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 NCBP2-AS2Q69YL0 99 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 C1orf228Q6PIY5 440 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 LRRC31Q6UY01 552 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 PSD3Q9NYI0 1048 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 STIM2Q9P246 746 aa25.51■■□□□ 1.67
RFX1-205ENST00000589239 GOLGA6L10A0A0M3HER8 536 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 F5H5T6 163 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 DCLK1O15075 740 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 MAP3K6O95382 1288 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 HOXC13P31276 330 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 HTR3DQ70Z44 454 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 RPRD1AQ96P16 312 aaPredicted RBP25.5■■□□□ 1.67
RFX1-205ENST00000589239 STOML2Q9UJZ1 356 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 HEY1Q9Y5J3 304 aa25.5■■□□□ 1.67
RFX1-205ENST00000589239 APOC4-APOC2K7ER74 178 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 APOC2P02655 101 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 ACBD5Q5T8D3 534 aaPredicted RBP25.49■■□□□ 1.67
RFX1-205ENST00000589239 BBS7Q8IWZ6 715 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 LGI2Q8N0V4 545 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 NETO2Q8NC67 525 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 DDX47Q9H0S4 455 aaKnown RBP25.49■■□□□ 1.67
RFX1-205ENST00000589239 IGLV3-10A0A075B6K4 115 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 H3BQ06 376 aaPredicted RBP25.49■■□□□ 1.67
RFX1-205ENST00000589239 OTUD4Q01804 1114 aaKnown RBP25.49■■□□□ 1.67
RFX1-205ENST00000589239 GBE1Q04446 702 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 ZSCAN26Q16670 478 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 DDX42Q86XP3 938 aaKnown RBP eCLIP25.49■■□□□ 1.67
RFX1-205ENST00000589239 KLHL7Q8IXQ5 586 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 NOA1Q8NC60 698 aaKnown RBP25.49■■□□□ 1.67
RFX1-205ENST00000589239 SMRP1Q8NCR6 262 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 ACTL9Q8TC94 416 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 RIPOR3Q96MK2 946 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 GUCD1Q96NT3 240 aa25.49■■□□□ 1.67
RFX1-205ENST00000589239 LATS1O95835 1130 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 HTR7P34969 479 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 VCPP55072 806 aaKnown RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 ALFQ53S48 1182 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 FAM78AQ5JUQ0 283 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 CIR1Q86X95 450 aaPredicted RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 CFAP52Q8N1V2 620 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 ST13P5Q8NFI4 369 aaPredicted RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 RPGRIP1Q96KN7 1286 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 PRICKLE1Q96MT3 831 aaPredicted RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 RASSF4Q9H2L5 321 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 GDE1Q9NZC3 331 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 PPARGC1AQ9UBK2 798 aaKnown RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 HELZP42694 1942 aaKnown RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 CNTN5O94779 1100 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 ZFXP17010 805 aaPredicted RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 TGM2P21980 687 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 SNX1Q13596 522 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 ZNF77Q15935 545 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 HABP4Q5JVS0 413 aaKnown RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 GPR153Q6NV75 609 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 CCDC33Q8N5R6 958 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 DEFB123Q8N688 67 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 P3H4Q92791 437 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 EXOC4Q96A65 974 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 MAGOHBQ96A72 148 aaKnown RBP25.48■■□□□ 1.67
RFX1-205ENST00000589239 ASB16Q96NS5 453 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 KRT12Q99456 494 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 ZYG11BQ9C0D3 744 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 CATSPERBQ9H7T0 1116 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 ARFGAP3Q9NP61 516 aa25.48■■□□□ 1.67
RFX1-205ENST00000589239 E2F8A0AVK6 867 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 DRGXA6NNA5 263 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 CCDC188H7C350 402 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 TSPAN3O60637 253 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 VIPR2P41587 438 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 SGSHP51688 502 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 SLC10A2Q12908 348 aaPredicted RBP25.47■■□□□ 1.67
RFX1-205ENST00000589239 KCTD19Q17RG1 926 aaPredicted RBP25.47■■□□□ 1.67
RFX1-205ENST00000589239 TFAP2DQ7Z6R9 452 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 NPWQ8N729 165 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 POMKQ9H5K3 350 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 NDFIP2Q9NV92 336 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 CDH7Q9ULB5 785 aa25.47■■□□□ 1.67
RFX1-205ENST00000589239 FGF10O15520 208 aaPredicted RBP25.46■■□□□ 1.67
RFX1-205ENST00000589239 MFSD11O43934 449 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 PHF2O75151 1096 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 RPS24P62847 133 aaKnown RBP25.46■■□□□ 1.67
RFX1-205ENST00000589239 CYP1B1Q16678 543 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 PPM1EQ8WY54 764 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms