RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SP9P0CG40 484 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 CD70P32970 193 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 PTPN5P54829 565 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 CSTF1Q05048 431 aaKnown RBP20.86■□□□□ 0.93
DDX39A-207ENST00000588542 FSCBQ5H9T9 825 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 RABGAP1LQ5R372 815 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 TTC39BQ5VTQ0 682 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-207ENST00000588542 SYT13Q7L8C5 426 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 CARNMT1Q8N4J0 409 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 CCDC33Q8N5R6 958 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 ARFGAP1Q8N6T3 406 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 ZNF513Q8N8E2 541 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-207ENST00000588542 KCNV2Q8TDN2 545 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 FNIP1Q8TF40 1166 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 RPRD1AQ96P16 312 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-207ENST00000588542 PACSIN1Q9BY11 444 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 MAGEB5Q9BZ81 275 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 MRPL47Q9HD33 250 aaKnown RBP20.86■□□□□ 0.93
DDX39A-207ENST00000588542 SPTLC3Q9NUV7 552 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 GGA2Q9UJY4 613 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 MMP17Q9ULZ9 603 aa20.86■□□□□ 0.93
DDX39A-207ENST00000588542 ARIH1Q9Y4X5 557 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-207ENST00000588542 DRGXA6NNA5 263 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 AKR1B10O60218 316 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ADAM23O75077 832 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 KLF8O95600 359 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-207ENST00000588542 PSMA2P25787 234 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 CDC25BP30305 580 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 LMAN2Q12907 356 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ZNF528Q3MIS6 628 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 HSF5Q4G112 596 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ACBD5Q5T8D3 534 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ADIPOR2Q86V24 386 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 CCAR2Q8N163 923 aaKnown RBP20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ZNF557Q8N988 423 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-207ENST00000588542 TXNDC5Q8NBS9 432 aaKnown RBP20.85■□□□□ 0.93
DDX39A-207ENST00000588542 NELL1Q92832 810 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 NTAN1Q96AB6 310 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ACDQ96AP0 544 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 CCDC42Q96M95 316 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ACOX2Q99424 681 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 ELOVL2Q9NXB9 296 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 CKAP5Q14008 2032 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 CHD5Q8TDI0 1954 aa20.85■□□□□ 0.93
DDX39A-207ENST00000588542 IGLV3-10A0A075B6K4 115 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 A0A1B0GVM2 712 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 TCAF2A6NFQ2 919 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 E9PAM4 449 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 SGK1O00141 431 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 CNTN5O94779 1100 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 PABPC1P11940 636 aaKnown RBP20.84■□□□□ 0.93
DDX39A-207ENST00000588542 HNRNPLP14866 589 aaKnown RBP eCLIP20.84■□□□□ 0.93
DDX39A-207ENST00000588542 SCAPQ12770 1279 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 DMC1Q14565 340 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 EIF4HQ15056 248 aaKnown RBP20.84■□□□□ 0.93
DDX39A-207ENST00000588542 ARL13BQ3SXY8 428 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 WFIKKN2Q8TEU8 576 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 PANX2Q96RD6 677 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 OSBPL2Q9H1P3 480 aa20.84■□□□□ 0.93
DDX39A-207ENST00000588542 INTS6Q9UL03 887 aaKnown RBP20.84■□□□□ 0.93
DDX39A-207ENST00000588542 FAM72CH0Y354 149 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 H0Y626 953 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 FECHP22830 423 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 NRG1Q02297 640 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-207ENST00000588542 DMWDQ09019 674 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 CDH18Q13634 790 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 FUT11Q495W5 492 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 ALFQ53S48 1182 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 FAM72AQ5TYM5 149 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 MANEALQ5VSG8 457 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 FAM72DQ6L9T8 149 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 CXorf57Q6NSI4 855 aaKnown RBP20.83■□□□□ 0.93
DDX39A-207ENST00000588542 SCYL2Q6P3W7 929 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 TMEM92Q6UXU6 159 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 CHST9Q7L1S5 443 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 SLFN11Q7Z7L1 901 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 FAM72BQ86X60 149 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 AHI1Q8N157 1196 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 SORCS1Q8WY21 1168 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 NUP85Q9BW27 656 aa20.83■□□□□ 0.93
DDX39A-207ENST00000588542 THAP10Q9P2Z0 257 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-207ENST00000588542 TIMM44O43615 452 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 SRGAP2O75044 1071 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 H2AFZP0C0S5 128 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 NTSR1P30989 418 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 HOXA6P31267 233 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 CDH4P55283 916 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 MBLAC2Q68D91 279 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 LRRC31Q6UY01 552 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 H2AFVQ71UI9 128 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 TRMT11Q7Z4G4 463 aaKnown RBP20.82■□□□□ 0.92
DDX39A-207ENST00000588542 OR52K2Q8NGK3 314 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 BTBD6Q96KE9 485 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 CIPCQ9C0C6 399 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 MPP6Q9NZW5 540 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 KIAA1522Q9P206 1035 aaPredicted RBP20.82■□□□□ 0.92
DDX39A-207ENST00000588542 OR12D3Q9UGF7 316 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 FZD10Q9ULW2 581 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 SLC8A2Q9UPR5 921 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 NEU3Q9UQ49 428 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms