RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 RECQLP46063 649 aaPredicted RBP7.25□□□□□ -1.25
TPM4-210ENST00000588507 MEOX1P50221 254 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 ARSDP51689 593 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 ADPRHP54922 357 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 TAF10Q12962 218 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 ZNF542PQ5EBM4 170 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 INTS6LQ5JSJ4 861 aaKnown RBP7.25□□□□□ -1.25
TPM4-210ENST00000588507 HECTD3Q5T447 861 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 TDRD10Q5VZ19 366 aaKnown RBP7.25□□□□□ -1.25
TPM4-210ENST00000588507 C9orf57Q5W0N0 161 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 HIST2H2BDQ6DRA6 164 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 NCAPH2Q6IBW4 605 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 MPZL3Q6UWV2 235 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 SND1Q7KZF4 910 aaKnown RBP eCLIP7.25□□□□□ -1.25
TPM4-210ENST00000588507 SLC35F3Q8IY50 421 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 SDR16C5Q8N3Y7 309 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 TBCKQ8TEA7 893 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 ACBD6Q9BR61 282 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 KIFC3Q9BVG8 833 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 SRRTQ9BXP5 876 aaKnown RBP7.25□□□□□ -1.25
TPM4-210ENST00000588507 CALN1Q9BXU9 219 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 MRPL4Q9BYD3 311 aaKnown RBP7.25□□□□□ -1.25
TPM4-210ENST00000588507 CPEB1Q9BZB8 566 aaKnown RBP7.25□□□□□ -1.25
TPM4-210ENST00000588507 LRRN3Q9H3W5 708 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 MRPL40Q9NQ50 206 aaKnown RBP7.25□□□□□ -1.25
TPM4-210ENST00000588507 ADAM21Q9UKJ8 722 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 DDX19BQ9UMR2 479 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 OSGIN2Q9Y236 505 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 PCDHB3Q9Y5E6 796 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 UNC13CQ8NB66 2214 aa7.25□□□□□ -1.25
TPM4-210ENST00000588507 A0A1B0GUH1 482 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 TTC26A0AVF1 554 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 E7EWF7 191 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 PIRO00625 290 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 AQP9O43315 295 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 GREM1O60565 184 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 DPM1O60762 260 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 RNGTTO60942 597 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 CXCL8P10145 99 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 CCL4P13236 92 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 GOT1P17174 413 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 PROZP22891 400 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 ANXA13P27216 316 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 MAP4P27816 1152 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 MAT2AP31153 395 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 PTK2BQ14289 1009 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 CST6Q15828 149 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 SPATA1Q5VX52 437 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 TMEM215Q68D42 235 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 ESRP1Q6NXG1 681 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 CWC27Q6UX04 472 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 VSTM1Q6UX27 236 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 CATSPER3Q86XQ3 398 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 APLFQ8IW19 511 aaPredicted RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 UNC5BQ8IZJ1 945 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 IQCKQ8N0W5 287 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 CISD2Q8N5K1 135 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 ST6GALNAC3Q8NDV1 305 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 PNPLA2Q96AD5 504 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 PKMYT1Q99640 499 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 MTA3Q9BTC8 594 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 SLC25A23Q9BV35 468 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 RBM28Q9NW13 759 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 DDX25Q9UHL0 483 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 CYTH4Q9UIA0 394 aa7.24□□□□□ -1.25
TPM4-210ENST00000588507 LSM7Q9UK45 103 aaKnown RBP7.24□□□□□ -1.25
TPM4-210ENST00000588507 NBEAL2Q6ZNJ1 2754 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 ABLIM1O14639 778 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 INPP4BO15327 924 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 PENKP01210 267 aaPredicted RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 CSF2P04141 144 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 ACAT1P24752 427 aaKnown RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 DNAJA1P31689 397 aaKnown RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 SLC8A1P32418 973 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 TAF6P49848 677 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 NOP14P78316 857 aaKnown RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 PPP2R3AQ06190 1150 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 EHHADHQ08426 723 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 PFKFB3Q16875 520 aaPredicted RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 SETMARQ53H47 684 aaPredicted RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 PHF19Q5T6S3 580 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 SLC6A19Q695T7 634 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 MOXD1Q6UVY6 613 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 C4orf50Q6ZRC1 276 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 FJX1Q86VR8 437 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 MICU3Q86XE3 530 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 MB21D2Q8IYB1 491 aaPredicted RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 NLGN4XQ8N0W4 816 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 NLGN4YQ8NFZ3 816 aaPredicted RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 OR13H1Q8NG92 308 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 LMX1AQ8TE12 382 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 CYB5D2Q8WUJ1 264 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 ITLN2Q8WWU7 325 aaPredicted RBP7.23□□□□□ -1.25
TPM4-210ENST00000588507 CCDC74AQ96AQ1 378 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 C18orf12Q96KH6 178 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 IFT74Q96LB3 600 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 TSPAN18Q96SJ8 248 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 CCSER1Q9C0I3 900 aa7.23□□□□□ -1.25
TPM4-210ENST00000588507 NACA2Q9H009 215 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms