RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 AOPEPQ8N6M6 819 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 OR2T3Q8NH03 318 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 CPA5Q8WXQ8 436 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 TTC17Q96AE7 1141 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 NUSAP1Q9BXS6 441 aaKnown RBP20.22■□□□□ 0.83
TPM4-208ENST00000588410 TMEM245Q9H330 911 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 ITM2CQ9NQX7 267 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 SIK3Q9Y2K2 1263 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 WDR87Q6ZQQ6 2873 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 ATXN2Q99700 1313 aaKnown RBP20.22■□□□□ 0.83
TPM4-208ENST00000588410 PATE3B3GLJ2 98 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 GOLGA8SH3BPF8 625 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 ITPKAP23677 461 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 HOXD12P35452 270 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 SULT1E1P49888 294 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 COPAP53621 1224 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 CAMK2GQ13555 558 aaPredicted RBP20.21■□□□□ 0.83
TPM4-208ENST00000588410 TRIM61Q5EBN2 209 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 PITRM1Q5JRX3 1037 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 SYCP2LQ5T4T6 812 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 XYLT1Q86Y38 959 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 ZNF366Q8N895 744 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 FOXJ1Q92949 421 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 TOE1Q96GM8 510 aaKnown RBP20.21■□□□□ 0.83
TPM4-208ENST00000588410 LMLNQ96KR4 655 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 HSPA12BQ96MM6 686 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 RPRD1AQ96P16 312 aaPredicted RBP20.21■□□□□ 0.83
TPM4-208ENST00000588410 FBRSQ9HAH7 460 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 CD93Q9NPY3 652 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 TMEM51Q9NW97 253 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 USP36Q9P275 1121 aaKnown RBP20.21■□□□□ 0.83
TPM4-208ENST00000588410 EVLQ9UI08 416 aaPredicted RBP20.21■□□□□ 0.83
TPM4-208ENST00000588410 PAXBP1Q9Y5B6 917 aa20.21■□□□□ 0.83
TPM4-208ENST00000588410 LNP1A1A4G5 178 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 LRRC10BA6NIK2 292 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 EPHB6O15197 1021 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 F9P00740 461 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 CFIP05156 583 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 ZNF18P17022 549 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 TPMTP51580 245 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 JAM2P57087 298 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 NOMO3P69849 1222 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 IRX4P78413 519 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 CDR2Q01850 454 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 NCAPHQ15003 741 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 ANO6Q4KMQ2 910 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 FSCBQ5H9T9 825 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 RNF219Q5W0B1 726 aaPredicted RBP20.2■□□□□ 0.82
TPM4-208ENST00000588410 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
TPM4-208ENST00000588410 MMS22LQ6ZRQ5 1243 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 RABEPKQ7Z6M1 372 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 RGL4Q8IZJ4 473 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 CEP76Q8TAP6 659 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 SLC20A1Q8WUM9 679 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 PRMT1Q99873 361 aaKnown RBP20.2■□□□□ 0.82
TPM4-208ENST00000588410 WDCPQ9H6R7 721 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 TMEM74BQ9NUR3 256 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 NOCTQ9UK39 431 aaKnown RBP20.2■□□□□ 0.82
TPM4-208ENST00000588410 PILRBQ9UKJ0 227 aa20.2■□□□□ 0.82
TPM4-208ENST00000588410 A0A1B0GVM2 712 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 TCAF2A6NFQ2 919 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 KCNA4P22459 653 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 OXCT1P55809 520 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 DEUP1Q05D60 604 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 AUHQ13825 339 aaKnown RBP20.19■□□□□ 0.82
TPM4-208ENST00000588410 DUOXA1Q1HG43 343 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 C2CD6Q53TS8 623 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 WDR45BQ5MNZ6 344 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 FBXL22Q6P050 247 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 CCAR2Q8N163 923 aaKnown RBP20.19■□□□□ 0.82
TPM4-208ENST00000588410 NPY6RQ99463 290 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 NUP58Q9BVL2 599 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 SIK2Q9H0K1 926 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 TMEM9BQ9NQ34 198 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 PRSS16Q9NQE7 514 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 PIGVQ9NUD9 493 aa20.19■□□□□ 0.82
TPM4-208ENST00000588410 WSB2Q9NYS7 404 aaPredicted RBP20.19■□□□□ 0.82
TPM4-208ENST00000588410 INTS6Q9UL03 887 aaKnown RBP20.19■□□□□ 0.82
TPM4-208ENST00000588410 SPTBN4Q9H254 2564 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 MED19A0JLT2 244 aaPredicted RBP20.18■□□□□ 0.82
TPM4-208ENST00000588410 C4orf47A7E2U8 309 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 SMTNL1A8MU46 457 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 MEI4A8MW99 385 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 PAGE1O75459 146 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 ECT2LQ008S8 904 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 SLC12A1Q13621 1099 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 PLEKHG6Q3KR16 790 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 SLC25A52Q3SY17 297 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 PPM1JQ5JR12 505 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 BRMS1LQ5PSV4 323 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 DAB2IPQ5VWQ8 1189 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 TRIM72Q6ZMU5 477 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 CIR1Q86X95 450 aaPredicted RBP20.18■□□□□ 0.82
TPM4-208ENST00000588410 SLC41A1Q8IVJ1 513 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 KDM1BQ8NB78 822 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 ZNF419Q96HQ0 510 aaPredicted RBP20.18■□□□□ 0.82
TPM4-208ENST00000588410 ERGIC2Q96RQ1 377 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 PPP1R9BQ96SB3 815 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 TBCBQ99426 244 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 GPR174Q9BXC1 333 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms