RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 BTBD6Q96KE9 485 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 DESI2Q9BSY9 194 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 DHX35Q9H5Z1 703 aaKnown RBP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 ARHGEF4Q9NR80 690 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 DDX56Q9NY93 547 aaKnown RBP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 AP4E1Q9UPM8 1137 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 TBC1D30Q9Y2I9 924 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 ALG6Q9Y672 507 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 MYH10P35580 1976 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 CXorf51AA0A1B0GTR3 108 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 RCCD1A6NED2 376 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 GOLGA6L9A6NEM1 432 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 WASH4PA8MWX3 477 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 ZNF487B1APH4 448 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 H3BRJ5 948 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 I6L893 689 aaPredicted RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 DAPK3O43293 454 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PSTPIP1O43586 416 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 SPOPO43791 374 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 BUB1BO60566 1050 aaPredicted RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 GPR37L1O60883 481 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 ATG13O75143 517 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 LRIG2O94898 1065 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 LUC7L3O95232 432 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 KAT7O95251 611 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 ATP5BP06576 529 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 CISD3P0C7P0 127 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 RARAP10276 462 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 EPHB2P29323 1055 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 OR1E1P30953 314 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 ARL4AP40617 200 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 RPS9P46781 194 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 SOX9P48436 509 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 MAPKAPK2P49137 400 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PLK1P53350 603 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 NUBP1P53384 320 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 VCPP55072 806 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 RPS24P62847 133 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 MRPS21P82921 87 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 SLC25A11Q02978 314 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 SEMA3BQ13214 749 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PON2Q15165 354 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 GAB4Q2WGN9 574 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 MANEALQ5VSG8 457 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 RWDD4Q6NW29 188 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 TRMT11Q7Z4G4 463 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 ANKS1BQ7Z6G8 1248 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 KIAA0907Q7Z7F0 614 aaPredicted RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 AHI1Q8N157 1196 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 CCAR2Q8N163 923 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 CFAP52Q8N1V2 620 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 CARNMT1Q8N4J0 409 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 LZTR1Q8N653 840 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 NAT16Q8N8M0 369 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 TERB1Q8NA31 727 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 KCTD6Q8NC69 237 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 FLCNQ8NFG4 579 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PJA1Q8NG27 643 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 TPCN2Q8NHX9 752 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 UCMAQ8WVF2 138 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 BHMTQ93088 406 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 IGSF8Q969P0 613 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 CLDN23Q96B33 292 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PRICKLE1Q96MT3 831 aaPredicted RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 SNRNP25Q9BV90 132 aaKnown RBP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 TBC1D17Q9HA65 648 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 LTB4R2Q9NPC1 389 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 ANLNQ9NQW6 1124 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PLK2Q9NYY3 685 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 PLA2G4CQ9UP65 541 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 DUSP10Q9Y6W6 482 aa9.34□□□□□ -0.91
CIRBP-218ENST00000588344 DOCK6Q96HP0 2047 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ILVBLA1L0T0 632 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 CCDC66A2RUB6 948 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 TMEM110-MUSTN1A8MSY1 372 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 MIF4GDA9UHW6 222 aaKnown RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 EEF2KO00418 725 aaKnown RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 CREB3O43889 395 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ASLP04424 464 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 CHRNB1P11230 501 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 COMTP21964 271 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 MSNP26038 577 aaKnown RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 HOXC13P31276 330 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 CETN2P41208 172 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 SLC6A11P48066 632 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 YBEYP58557 167 aaPredicted RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 TPI1P60174 286 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 SULT2A1Q06520 285 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 CCINQ13939 588 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 KRT81Q14533 505 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 UBXN2BQ14CS0 331 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 RAB6CQ53S08 254 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 KCNT1Q5JUK3 1230 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ZFYVE27Q5T4F4 411 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 SDE2Q6IQ49 451 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms