RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 ESPNB1AK53 854 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 SLC9A3R1O14745 358 aaPredicted RBP18.86■□□□□ 0.61
H3F3B-206ENST00000587560 TUBB4AP04350 444 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 PYGMP11217 842 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 PRLRP16471 622 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 PSMC3P17980 439 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 CHKAP35790 457 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 CDKN2BP42772 138 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 SGSHP51688 502 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 CDH6P55285 790 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 AMPD2Q01433 879 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 PPP2R5EQ16537 467 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 RFWD3Q6PCD5 774 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 MFSD7Q6UXD7 560 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 NLRP14Q86W24 1093 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 CHSY1Q86X52 802 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 UBL4BQ8N7F7 174 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 ST13P5Q8NFI4 369 aaPredicted RBP18.86■□□□□ 0.61
H3F3B-206ENST00000587560 C16orf45Q96MC5 204 aaPredicted RBP18.86■□□□□ 0.61
H3F3B-206ENST00000587560 DDX50Q9BQ39 737 aaKnown RBP18.86■□□□□ 0.61
H3F3B-206ENST00000587560 SIK2Q9H0K1 926 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 CARD9Q9H257 536 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 HPS4Q9NQG7 708 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 IGSF9Q9P2J2 1179 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 PKD1L2Q7Z442 2459 aa18.86■□□□□ 0.61
H3F3B-206ENST00000587560 PTPRZ1P23471 2315 aaPredicted RBP18.86■□□□□ 0.61
H3F3B-206ENST00000587560 LRRD1A4D1F6 860 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 WASH4PA8MWX3 477 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 CHADO15335 359 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 ZRANB2O95218 330 aaKnown RBP eCLIP18.85■□□□□ 0.615e-17■■■□□ 18.4
H3F3B-206ENST00000587560 PENKP01210 267 aaPredicted RBP18.85■□□□□ 0.61
H3F3B-206ENST00000587560 KRT1P04264 644 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 TNNT1P13805 278 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 GOT1P17174 413 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 SP100P23497 879 aaPredicted RBP18.85■□□□□ 0.61
H3F3B-206ENST00000587560 GJC1P36383 396 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 COPS2P61201 443 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 ZP2Q05996 745 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 MMRN1Q13201 1228 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 GAB4Q2WGN9 574 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 MPP7Q5T2T1 576 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 RHBDF2Q6PJF5 856 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 SPOCD1Q6ZMY3 1216 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 ADHFE1Q8IWW8 467 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 LGI2Q8N0V4 545 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 RSAD2Q8WXG1 361 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 RPGRIP1Q96KN7 1286 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 CSPG4P5Q96PW8 444 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 NAPGQ99747 312 aaPredicted RBP18.85■□□□□ 0.61
H3F3B-206ENST00000587560 HERPUD2Q9BSE4 406 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 RETREG1Q9H6L5 497 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 KCNK12Q9HB15 430 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 DUS2Q9NX74 493 aaKnown RBP18.85■□□□□ 0.61
H3F3B-206ENST00000587560 VANGL2Q9ULK5 521 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 SNX12Q9UMY4 172 aa18.85■□□□□ 0.61
H3F3B-206ENST00000587560 KIAA1549LQ6ZVL6 1849 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 hCG_1818297A0A087WSY0 165 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 F5H5T6 163 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 CES2O00748 559 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 DCLK1O15075 740 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 RPS24P62847 133 aaKnown RBP18.84■□□□□ 0.61
H3F3B-206ENST00000587560 PDGFRLQ15198 375 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 FYB2Q5VWT5 728 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 AADACL2Q6P093 401 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 SYT10Q6XYQ8 523 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 RFX8Q6ZV50 586 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 TMEM25Q86YD3 366 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 PQLC3Q8N755 202 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 KCTD6Q8NC69 237 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 PCDH19Q8TAB3 1148 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 IRF7Q92985 503 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 RNF25Q96BH1 459 aaPredicted RBP18.84■□□□□ 0.61
H3F3B-206ENST00000587560 RBM41Q96IZ5 413 aaKnown RBP18.84■□□□□ 0.61
H3F3B-206ENST00000587560 ZFYVE19Q96K21 471 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 RNF157Q96PX1 679 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 EPAS1Q99814 870 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 KLC2Q9H0B6 622 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 ARHGEF4Q9NR80 690 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 LIMD1Q9UGP4 676 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 EFR3BQ9Y2G0 817 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 TICRRQ7Z2Z1 1910 aa18.84■□□□□ 0.61
H3F3B-206ENST00000587560 NUP205Q92621 2012 aa18.83■□□□□ 0.61
H3F3B-206ENST00000587560 OTOL1A6NHN0 477 aaPredicted RBP18.83■□□□□ 0.6
H3F3B-206ENST00000587560 H3BRJ5 948 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 KIF2AO00139 706 aaPredicted RBP18.83■□□□□ 0.6
H3F3B-206ENST00000587560 EEF2KO00418 725 aaKnown RBP18.83■□□□□ 0.6
H3F3B-206ENST00000587560 TRDMT1O14717 391 aaKnown RBP18.83■□□□□ 0.6
H3F3B-206ENST00000587560 DCXO43602 365 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 CYP17A1P05093 508 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 ARSAP15289 507 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 HOXD9P28356 352 aaPredicted RBP18.83■□□□□ 0.6
H3F3B-206ENST00000587560 PTPN5P54829 565 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 VCPP55072 806 aaKnown RBP18.83■□□□□ 0.6
H3F3B-206ENST00000587560 GRM2Q14416 872 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 DHCR24Q15392 516 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 ALFQ53S48 1182 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 ANKRD20A8PQ5CZ79 823 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 TFDP3Q5H9I0 405 aa18.83■□□□□ 0.6
H3F3B-206ENST00000587560 PPP6R3Q5H9R7 873 aaPredicted RBP18.83■□□□□ 0.6
H3F3B-206ENST00000587560 TTC39BQ5VTQ0 682 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms