RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CDH9Q9ULB4 789 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 PCDHB4Q9Y5E5 795 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 RAD54BQ9Y620 910 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 SCINQ9Y6U3 715 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 FREM2Q5SZK8 3169 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 TNRC6BQ9UPQ9 1833 aaKnown RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 ITPR1Q14643 2758 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 A0A0U1RQJ8 604 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 TBC1D3BA6NDS4 549 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 SOBPA7XYQ1 873 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 ENC1O14682 589 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 TNFRSF10BO14763 440 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 FANCGO15287 622 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 COCHO43405 550 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 BUB1O43683 1085 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 ERLIN1O75477 346 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 ZIC2O95409 532 aaPredicted RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 VNN1O95497 513 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 FTLP02792 175 aaPredicted RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 PAEPP09466 180 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 PNMA6AP0CW24 399 aaPredicted RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 TCF3P15923 654 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 WARSP23381 471 aaKnown RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 MAGEA11P43364 429 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 NSFP46459 744 aaKnown RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 TNNC1P63316 161 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 SLC7A9P82251 487 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 MRPS21P82921 87 aaKnown RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 FMO1Q01740 532 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 RPL6Q02878 288 aaKnown RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 CENPCQ03188 943 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 SEMA3BQ13214 749 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 RPS6KA1Q15418 735 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 STILQ15468 1287 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 EGFLAMQ63HQ2 1017 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 ACAD10Q6JQN1 1059 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 TMEM270Q6UE05 265 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 C4orf50Q6ZRC1 276 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 SLFN11Q7Z7L1 901 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 DAAM2Q86T65 1068 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 NOP9Q86U38 636 aaKnown RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 SLC47A2Q86VL8 602 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 TMEM25Q86YD3 366 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 SYT12Q8IV01 421 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 MINDY1Q8N5J2 469 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 UBL4BQ8N7F7 174 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 RBBP8NLQ8NC74 664 aaPredicted RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 OR6B3Q8NGW1 331 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 TPCN2Q8NHX9 752 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 BHMTQ93088 406 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 EXOC4Q96A65 974 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 P2RY11Q96G91 374 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 FUBP3Q96I24 572 aaKnown RBP eCLIP8.16□□□□□ -1.1
VMP1-204ENST00000587259 SPATA17Q96L03 361 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 OSBPL9Q96SU4 736 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 TTLL2Q9BWV7 592 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 B3GNT5Q9BYG0 378 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 MIS12Q9H081 205 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 CALCOCO1Q9P1Z2 691 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 EVLQ9UI08 416 aaPredicted RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 AMFRQ9UKV5 643 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 KIAA1257Q9ULG3 409 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 STRIP2Q9ULQ0 834 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 CYP8B1Q9UNU6 501 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 DUSP10Q9Y6W6 482 aa8.16□□□□□ -1.1
VMP1-204ENST00000587259 ANKRD11Q6UB99 2663 aaPredicted RBP8.16□□□□□ -1.1
VMP1-204ENST00000587259 PCNX2A6NKB5 2137 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 IGHV1OR15-9A0A0B4J2B8 117 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 TARSL2A2RTX5 802 aaKnown RBP8.15□□□□□ -1.1
VMP1-204ENST00000587259 WASH3PC4AMC7 463 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 THAP12O43422 761 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 SH3BP5O60239 455 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 TULP3O75386 442 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 ALDH1A2O94788 518 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 OLFM2O95897 454 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 TBX18O95935 607 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 CALB1P05937 261 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 CD59P13987 128 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 PTPN1P18031 435 aaKnown RBP8.15□□□□□ -1.1
VMP1-204ENST00000587259 NDUFV2P19404 249 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 ACO1P21399 889 aaKnown RBP8.15□□□□□ -1.1
VMP1-204ENST00000587259 GNL1P36915 607 aaPredicted RBP8.15□□□□□ -1.1
VMP1-204ENST00000587259 GRIA2P42262 883 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 MLLT3P42568 568 aaPredicted RBP8.15□□□□□ -1.1
VMP1-204ENST00000587259 ZNF132P52740 706 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 CDH8P55286 799 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 SNX16P57768 344 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 MYL6P60660 151 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 ZNF33AQ06730 810 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 LMAN2Q12907 356 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 ACAP1Q15027 740 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 CLEC16AQ2KHT3 1053 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 ANO4Q32M45 955 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 MAP9Q49MG5 647 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 GLE1Q53GS7 698 aaKnown RBP8.15□□□□□ -1.1
VMP1-204ENST00000587259 EOGTQ5NDL2 527 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 TEX35Q5T0J7 233 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 SLC23A3Q6PIS1 610 aa8.15□□□□□ -1.1
VMP1-204ENST00000587259 VSTM1Q6UX27 236 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms