RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ATP11AP98196 1134 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
ATG4D-207ENST00000587256 PTP4A2Q12974 167 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 AUHQ13825 339 aaKnown RBP15.31■□□□□ 0.04
ATG4D-207ENST00000587256 CDO1Q16878 200 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 FIGNQ5HY92 759 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 E4F1Q66K89 784 aaPredicted RBP15.31■□□□□ 0.04
ATG4D-207ENST00000587256 FBXL22Q6P050 247 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 LRSAM1Q6UWE0 723 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 KIAA1324Q6UXG2 1013 aaKnown RBP15.31■□□□□ 0.04
ATG4D-207ENST00000587256 MON1BQ7L1V2 547 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 ARCQ7LC44 396 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 IRF2BP2Q7Z5L9 587 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 ADIPOR2Q86V24 386 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 KIAA2013Q8IYS2 634 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 C3orf20Q8ND61 904 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 JOSD2Q8TAC2 188 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 RLN3Q8WXF3 142 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 NUP58Q9BVL2 599 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 EDEM3Q9BZQ6 932 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 ARHGEF38Q9NXL2 777 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 PLA2G4CQ9UP65 541 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 HS3ST4Q9Y661 456 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 MUC22E2RYF6 1773 aaPredicted RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 DLDP09622 509 aaKnown RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 KRT3P12035 628 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 NDUFV2P19404 249 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 PRKCHP24723 683 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 ATXN1P54253 815 aaKnown RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 GSCP56915 257 aaPredicted RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 KLHL30Q0D2K2 578 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 BYSLQ13895 437 aaKnown RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 PLK5Q496M5 336 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 TDRD12Q587J7 1177 aaKnown RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 FSCBQ5H9T9 825 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 PITRM1Q5JRX3 1037 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 PPP1R2P3Q6NXS1 205 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 KIAA0907Q7Z7F0 614 aaPredicted RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 FAM131BQ86XD5 332 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 OLIG1Q8TAK6 271 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 RXFP2Q8WXD0 754 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 HAUS4Q9H6D7 363 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 KIAA1522Q9P206 1035 aaPredicted RBP15.3■□□□□ 0.04
ATG4D-207ENST00000587256 USP18Q9UMW8 372 aa15.3■□□□□ 0.04
ATG4D-207ENST00000587256 ZNF292O60281 2723 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 A0A1W2PQJ5 194 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 C2CD4BA6NLJ0 364 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 TMCO5BA8MYB1 307 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 MAP3K13O43283 966 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 RHOBTB1O94844 696 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 ASLP04424 464 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 HLA-EP13747 358 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 BCKDHBP21953 392 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 PBX1P40424 430 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 P2RY2P41231 377 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 CSKP41240 450 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 PTPN9P43378 593 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 ST8SIA6P61647 398 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 ENPP2Q13822 863 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 C15orf59Q2T9L4 293 aaPredicted RBP15.29■□□□□ 0.04
ATG4D-207ENST00000587256 ACAD10Q6JQN1 1059 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 LRRC31Q6UY01 552 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 CACUL1Q86Y37 369 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 ZNF366Q8N895 744 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 RNF214Q8ND24 703 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 IGSF8Q969P0 613 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 IQCDQ96DY2 449 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 MCEEQ96PE7 176 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 SYT11Q9BT88 431 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 DUSP15Q9H1R2 295 aaPredicted RBP15.29■□□□□ 0.04
ATG4D-207ENST00000587256 SLC6A17Q9H1V8 727 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 CD248Q9HCU0 757 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 ANLNQ9NQW6 1124 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 AIPL1Q9NZN9 384 aa15.29■□□□□ 0.04
ATG4D-207ENST00000587256 SPAG17Q6Q759 2223 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 WDR87Q6ZQQ6 2873 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 CBFA2T2O43439 604 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 EPN2O95208 641 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 DESP17661 470 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 GPD1P21695 349 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 PRKCIP41743 596 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 NUMBP49757 651 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 IRAK1P51617 712 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 OXCT1P55809 520 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 SPEM2Q0P670 501 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 ZNF177Q13360 481 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 PTPRNQ16849 979 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 PLEKHG6Q3KR16 790 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 ARL13BQ3SXY8 428 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 CCDC14Q49A88 953 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 ACBD5Q5T8D3 534 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 RNF219Q5W0B1 726 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 PMS2CLQ68D20 193 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 DCUN1D2Q6PH85 259 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 ZNF571Q7Z3V5 609 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 C14orf80Q86SX3 495 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 GPR161Q8N6U8 529 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms